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Genotyping SARS-CoV-2 through an interactive web application.
Maan H, Mbareche H, Raphenya AR, Banerjee A, Nasir JA, Kozak RA, Knox N, Mubareka S, McArthur AG, Wang B. Maan H, et al. Among authors: nasir ja. Lancet Digit Health. 2020 Jul;2(7):e340-e341. doi: 10.1016/S2589-7500(20)30140-0. Epub 2020 Jun 12. Lancet Digit Health. 2020. PMID: 32835191 Free PMC article. No abstract available.
CARD 2020: antibiotic resistome surveillance with the comprehensive antibiotic resistance database.
Alcock BP, Raphenya AR, Lau TTY, Tsang KK, Bouchard M, Edalatmand A, Huynh W, Nguyen AV, Cheng AA, Liu S, Min SY, Miroshnichenko A, Tran HK, Werfalli RE, Nasir JA, Oloni M, Speicher DJ, Florescu A, Singh B, Faltyn M, Hernandez-Koutoucheva A, Sharma AN, Bordeleau E, Pawlowski AC, Zubyk HL, Dooley D, Griffiths E, Maguire F, Winsor GL, Beiko RG, Brinkman FSL, Hsiao WWL, Domselaar GV, McArthur AG. Alcock BP, et al. Among authors: nasir ja. Nucleic Acids Res. 2020 Jan 8;48(D1):D517-D525. doi: 10.1093/nar/gkz935. Nucleic Acids Res. 2020. PMID: 31665441 Free PMC article.
Isolation, Sequence, Infectivity, and Replication Kinetics of Severe Acute Respiratory Syndrome Coronavirus 2.
Banerjee A, Nasir JA, Budylowski P, Yip L, Aftanas P, Christie N, Ghalami A, Baid K, Raphenya AR, Hirota JA, Miller MS, McGeer AJ, Ostrowski M, Kozak RA, McArthur AG, Mossman K, Mubareka S. Banerjee A, et al. Among authors: nasir ja. Emerg Infect Dis. 2020 Sep;26(9):2054-2063. doi: 10.3201/eid2609.201495. Epub 2020 Jun 19. Emerg Infect Dis. 2020. PMID: 32558639 Free PMC article.
Surface and Air Contamination With Severe Acute Respiratory Syndrome Coronavirus 2 From Hospitalized Coronavirus Disease 2019 Patients in Toronto, Canada, March-May 2020.
Kotwa JD, Jamal AJ, Mbareche H, Yip L, Aftanas P, Barati S, Bell NG, Bryce E, Coomes E, Crowl G, Duchaine C, Faheem A, Farooqi L, Hiebert R, Katz K, Khan S, Kozak R, Li AX, Mistry HP, Mozafarihashjin M, Nasir JA, Nirmalarajah K, Panousis EM, Paterson A, Plenderleith S, Powis J, Prost K, Schryer R, Taylor M, Veillette M, Wong T, Zoe Zhong X, McArthur AG, McGeer AJ, Mubareka S. Kotwa JD, et al. Among authors: nasir ja. J Infect Dis. 2022 Mar 2;225(5):768-776. doi: 10.1093/infdis/jiab578. J Infect Dis. 2022. PMID: 34850051 Free PMC article.
CARD 2023: expanded curation, support for machine learning, and resistome prediction at the Comprehensive Antibiotic Resistance Database.
Alcock BP, Huynh W, Chalil R, Smith KW, Raphenya AR, Wlodarski MA, Edalatmand A, Petkau A, Syed SA, Tsang KK, Baker SJC, Dave M, McCarthy MC, Mukiri KM, Nasir JA, Golbon B, Imtiaz H, Jiang X, Kaur K, Kwong M, Liang ZC, Niu KC, Shan P, Yang JYJ, Gray KL, Hoad GR, Jia B, Bhando T, Carfrae LA, Farha MA, French S, Gordzevich R, Rachwalski K, Tu MM, Bordeleau E, Dooley D, Griffiths E, Zubyk HL, Brown ED, Maguire F, Beiko RG, Hsiao WWL, Brinkman FSL, Van Domselaar G, McArthur AG. Alcock BP, et al. Among authors: nasir ja. Nucleic Acids Res. 2023 Jan 6;51(D1):D690-D699. doi: 10.1093/nar/gkac920. Nucleic Acids Res. 2023. PMID: 36263822 Free PMC article.
SARS-CoV-2 Outbreak Investigation Using Contact Tracing and Whole-Genome Sequencing in an Ontario Tertiary Care Hospital.
Tsang KK, Ahmad S, Aljarbou A, Al Salem M, Baker SJC, Panousis EM, Derakhshani H, Rossi L, Nasir JA, Bulir DC, Surette MG, Lee RS, Smaill F, Mertz D, McArthur AG, Khan S. Tsang KK, et al. Among authors: nasir ja. Microbiol Spectr. 2023 Jun 15;11(3):e0190022. doi: 10.1128/spectrum.01900-22. Epub 2023 Apr 24. Microbiol Spectr. 2023. PMID: 37093060 Free PMC article.
Sensitivity to Neutralizing Antibodies and Resistance to Type I Interferons in SARS-CoV-2 R.1 Lineage Variants, Canada.
Jacob RA, Zhang A, Ajoge HO, D'Agostino MR, Nirmalarajah K, Shigayeva A, Demian WL, Baker SJC, Derakhshani H, Rossi L, Nasir JA, Panousis EM, Draia AN, Vermeiren C, Gilchrist J, Smieja N, Bulir D, Smieja M, Surette MG, McArthur AG, McGeer AJ, Mubareka S, Banerjee A, Miller MS, Mossman K. Jacob RA, et al. Among authors: nasir ja. Emerg Infect Dis. 2023 Jul;29(7):1386-1396. doi: 10.3201/eid2907.230198. Epub 2023 Jun 12. Emerg Infect Dis. 2023. PMID: 37308158 Free PMC article.
42 results