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DROPA: DRIP-seq optimized peak annotator.
Russo M, De Lucca B, Flati T, Gioiosa S, Chillemi G, Capranico G. Russo M, et al. Among authors: flati t. BMC Bioinformatics. 2019 Aug 6;20(1):414. doi: 10.1186/s12859-019-3009-9. BMC Bioinformatics. 2019. PMID: 31387525 Free PMC article.
ELIXIR-IT HPC@CINECA: high performance computing resources for the bioinformatics community.
Castrignanò T, Gioiosa S, Flati T, Cestari M, Picardi E, Chiara M, Fratelli M, Amente S, Cirilli M, Tangaro MA, Chillemi G, Pesole G, Zambelli F. Castrignanò T, et al. Among authors: flati t. BMC Bioinformatics. 2020 Aug 21;21(Suppl 10):352. doi: 10.1186/s12859-020-03565-8. BMC Bioinformatics. 2020. PMID: 32838759 Free PMC article.
RNA Editing Detection in HPC Infrastructures.
Lo Giudice C, Mansi L, Flati T, Gioiosa S, Chillemi G, Libro P, Castrignanò T, Pesole G, Picardi E. Lo Giudice C, et al. Among authors: flati t. Methods Mol Biol. 2021;2284:253-270. doi: 10.1007/978-1-0716-1307-8_14. Methods Mol Biol. 2021. PMID: 33835447
CoVaCS: a consensus variant calling system.
Chiara M, Gioiosa S, Chillemi G, D'Antonio M, Flati T, Picardi E, Zambelli F, Horner DS, Pesole G, Castrignanò T. Chiara M, et al. Among authors: flati t. BMC Genomics. 2018 Feb 5;19(1):120. doi: 10.1186/s12864-018-4508-1. BMC Genomics. 2018. PMID: 29402227 Free PMC article.