Rigoutsos I - Search Results

1

On the expanding roles of tRNA fragments in modulating cell behavior.

Magee R, Rigoutsos I. Magee R, et al. Among authors: rigoutsos i. Nucleic Acids Res. 2020 Sep 25;48(17):9433-9448. doi: 10.1093/nar/gkaa657. Nucleic Acids Res. 2020. PMID: 32890397 Free PMC article. Review.

2

Beyond the one-locus-one-miRNA paradigm: microRNA isoforms enable deeper insights into breast cancer heterogeneity.

Telonis AG, Loher P, Jing Y, Londin E, Rigoutsos I. Telonis AG, et al. Among authors: rigoutsos i. Nucleic Acids Res. 2015 Oct 30;43(19):9158-75. doi: 10.1093/nar/gkv922. Epub 2015 Sep 22. Nucleic Acids Res. 2015. PMID: 26400174 Free PMC article.

3

Consequential considerations when mapping tRNA fragments.

Telonis AG, Loher P, Kirino Y, Rigoutsos I. Telonis AG, et al. Among authors: rigoutsos i. BMC Bioinformatics. 2016 Mar 10;17:123. doi: 10.1186/s12859-016-0921-0. BMC Bioinformatics. 2016. PMID: 26961774 Free PMC article.

4

MINTbase: a framework for the interactive exploration of mitochondrial and nuclear tRNA fragments.

Pliatsika V, Loher P, Telonis AG, Rigoutsos I. Pliatsika V, et al. Among authors: rigoutsos i. Bioinformatics. 2016 Aug 15;32(16):2481-9. doi: 10.1093/bioinformatics/btw194. Epub 2016 Apr 13. Bioinformatics. 2016. PMID: 27153631 Free PMC article.

5

YAMAT-seq: an efficient method for high-throughput sequencing of mature transfer RNAs.

Shigematsu M, Honda S, Loher P, Telonis AG, Rigoutsos I, Kirino Y. Shigematsu M, et al. Among authors: rigoutsos i. Nucleic Acids Res. 2017 May 19;45(9):e70. doi: 10.1093/nar/gkx005. Nucleic Acids Res. 2017. PMID: 28108659 Free PMC article.

6

Threshold-seq: a tool for determining the threshold in short RNA-seq datasets.

Magee R, Loher P, Londin E, Rigoutsos I. Magee R, et al. Among authors: rigoutsos i. Bioinformatics. 2017 Jul 1;33(13):2034-2036. doi: 10.1093/bioinformatics/btx073. Bioinformatics. 2017. PMID: 28203700 Free PMC article.

7

Knowledge about the presence or absence of miRNA isoforms (isomiRs) can successfully discriminate amongst 32 TCGA cancer types.

Telonis AG, Magee R, Loher P, Chervoneva I, Londin E, Rigoutsos I. Telonis AG, et al. Among authors: rigoutsos i. Nucleic Acids Res. 2017 Apr 7;45(6):2973-2985. doi: 10.1093/nar/gkx082. Nucleic Acids Res. 2017. PMID: 28206648 Free PMC article.

8

MINTmap: fast and exhaustive profiling of nuclear and mitochondrial tRNA fragments from short RNA-seq data.

Loher P, Telonis AG, Rigoutsos I. Loher P, et al. Among authors: rigoutsos i. Sci Rep. 2017 Feb 21;7:41184. doi: 10.1038/srep41184. Sci Rep. 2017. PMID: 28220888 Free PMC article.

9

The biogenesis pathway of tRNA-derived piRNAs in Bombyx germ cells.

Honda S, Kawamura T, Loher P, Morichika K, Rigoutsos I, Kirino Y. Honda S, et al. Among authors: rigoutsos i. Nucleic Acids Res. 2017 Sep 6;45(15):9108-9120. doi: 10.1093/nar/gkx537. Nucleic Acids Res. 2017. PMID: 28645172 Free PMC article.

10

Assessment of isomiR Discrimination Using Commercial qPCR Methods.

Magee R, Telonis AG, Cherlin T, Rigoutsos I, Londin E. Magee R, et al. Among authors: rigoutsos i. Noncoding RNA. 2017 Jun;3(2):18. doi: 10.3390/ncrna3020018. Epub 2017 Mar 24. Noncoding RNA. 2017. PMID: 28730153 Free PMC article.

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