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143 results

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Page 1
Multi-omic detection of Mycobacterium leprae in archaeological human dental calculus.
Fotakis AK, Denham SD, Mackie M, Orbegozo MI, Mylopotamitaki D, Gopalakrishnan S, Sicheritz-Pontén T, Olsen JV, Cappellini E, Zhang G, Christophersen A, Gilbert MTP, Vågene ÅJ. Fotakis AK, et al. Philos Trans R Soc Lond B Biol Sci. 2020 Nov 23;375(1812):20190584. doi: 10.1098/rstb.2019.0584. Epub 2020 Oct 5. Philos Trans R Soc Lond B Biol Sci. 2020. PMID: 33012227 Free PMC article.
The population genomic legacy of the second plague pandemic.
Gopalakrishnan S, Ebenesersdóttir SS, Lundstrøm IKC, Turner-Walker G, Moore KHS, Luisi P, Margaryan A, Martin MD, Ellegaard MR, Magnússon ÓÞ, Sigurðsson Á, Snorradóttir S, Magnúsdóttir DN, Laffoon JE, van Dorp L, Liu X, Moltke I, Ávila-Arcos MC, Schraiber JG, Rasmussen S, Juan D, Gelabert P, de-Dios T, Fotakis AK, Iraeta-Orbegozo M, Vågene ÅJ, Denham SD, Christophersen A, Stenøien HK, Vieira FG, Liu S, Günther T, Kivisild T, Moseng OG, Skar B, Cheung C, Sandoval-Velasco M, Wales N, Schroeder H, Campos PF, Guðmundsdóttir VB, Sicheritz-Ponten T, Petersen B, Halgunset J, Gilbert E, Cavalleri GL, Hovig E, Kockum I, Olsson T, Alfredsson L, Hansen TF, Werge T, Willerslev E, Balloux F, Marques-Bonet T, Lalueza-Fox C, Nielsen R, Stefánsson K, Helgason A, Gilbert MTP. Gopalakrishnan S, et al. Curr Biol. 2022 Nov 7;32(21):4743-4751.e6. doi: 10.1016/j.cub.2022.09.023. Epub 2022 Oct 1. Curr Biol. 2022. PMID: 36182700 Free PMC article.
Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing.
Mak SST, Gopalakrishnan S, Carøe C, Geng C, Liu S, Sinding MS, Kuderna LFK, Zhang W, Fu S, Vieira FG, Germonpré M, Bocherens H, Fedorov S, Petersen B, Sicheritz-Pontén T, Marques-Bonet T, Zhang G, Jiang H, Gilbert MTP. Mak SST, et al. Gigascience. 2017 Aug 1;6(8):1-13. doi: 10.1093/gigascience/gix049. Gigascience. 2017. PMID: 28854615 Free PMC article.
Evolutionary history of the extinct Sardinian dhole.
Ciucani MM, Jensen JK, Sinding MS, Smith O, Lucenti SB, Rosengren E, Rook L, Tuveri C, Arca M, Cappellini E, Galaverni M, Randi E, Guo C, Zhang G, Sicheritz-Pontén T, Dalén L, Gilbert MTP, Gopalakrishnan S. Ciucani MM, et al. Curr Biol. 2021 Dec 20;31(24):5571-5579.e6. doi: 10.1016/j.cub.2021.09.059. Epub 2021 Oct 15. Curr Biol. 2021. PMID: 34655517 Free article.
Genomes of Pleistocene Siberian Wolves Uncover Multiple Extinct Wolf Lineages.
Ramos-Madrigal J, Sinding MS, Carøe C, Mak SST, Niemann J, Samaniego Castruita JA, Fedorov S, Kandyba A, Germonpré M, Bocherens H, Feuerborn TR, Pitulko VV, Pavlova EY, Nikolskiy PA, Kasparov AK, Ivanova VV, Larson G, Frantz LAF, Willerslev E, Meldgaard M, Petersen B, Sicheritz-Ponten T, Bachmann L, Wiig Ø, Hansen AJ, Gilbert MTP, Gopalakrishnan S. Ramos-Madrigal J, et al. Curr Biol. 2021 Jan 11;31(1):198-206.e8. doi: 10.1016/j.cub.2020.10.002. Epub 2020 Oct 29. Curr Biol. 2021. PMID: 33125870 Free PMC article.
Historical population declines prompted significant genomic erosion in the northern and southern white rhinoceros (Ceratotherium simum).
Sánchez-Barreiro F, Gopalakrishnan S, Ramos-Madrigal J, Westbury MV, de Manuel M, Margaryan A, Ciucani MM, Vieira FG, Patramanis Y, Kalthoff DC, Timmons Z, Sicheritz-Pontén T, Dalén L, Ryder OA, Zhang G, Marquès-Bonet T, Moodley Y, Gilbert MTP. Sánchez-Barreiro F, et al. Mol Ecol. 2021 Dec;30(23):6355-6369. doi: 10.1111/mec.16043. Epub 2021 Jul 7. Mol Ecol. 2021. PMID: 34176179 Free PMC article.
The evolutionary history of extinct and living lions.
de Manuel M, Barnett R, Sandoval-Velasco M, Yamaguchi N, Garrett Vieira F, Zepeda Mendoza ML, Liu S, Martin MD, Sinding MS, Mak SST, Carøe C, Liu S, Guo C, Zheng J, Zazula G, Baryshnikov G, Eizirik E, Koepfli KP, Johnson WE, Antunes A, Sicheritz-Ponten T, Gopalakrishnan S, Larson G, Yang H, O'Brien SJ, Hansen AJ, Zhang G, Marques-Bonet T, Gilbert MTP. de Manuel M, et al. Proc Natl Acad Sci U S A. 2020 May 19;117(20):10927-10934. doi: 10.1073/pnas.1919423117. Epub 2020 May 4. Proc Natl Acad Sci U S A. 2020. PMID: 32366643 Free PMC article.
Ancient proteins resolve controversy over the identity of Genyornis eggshell.
Demarchi B, Stiller J, Grealy A, Mackie M, Deng Y, Gilbert T, Clarke J, Legendre LJ, Boano R, Sicheritz-Pontén T, Magee J, Zhang G, Bunce M, Collins MJ, Miller G. Demarchi B, et al. Proc Natl Acad Sci U S A. 2022 Oct 25;119(43):e2109326119. doi: 10.1073/pnas.2109326119. Epub 2022 May 24. Proc Natl Acad Sci U S A. 2022. PMID: 35609205 Free PMC article.
Arctic-adapted dogs emerged at the Pleistocene-Holocene transition.
Sinding MS, Gopalakrishnan S, Ramos-Madrigal J, de Manuel M, Pitulko VV, Kuderna L, Feuerborn TR, Frantz LAF, Vieira FG, Niemann J, Samaniego Castruita JA, Carøe C, Andersen-Ranberg EU, Jordan PD, Pavlova EY, Nikolskiy PA, Kasparov AK, Ivanova VV, Willerslev E, Skoglund P, Fredholm M, Wennerberg SE, Heide-Jørgensen MP, Dietz R, Sonne C, Meldgaard M, Dalén L, Larson G, Petersen B, Sicheritz-Pontén T, Bachmann L, Wiig Ø, Marques-Bonet T, Hansen AJ, Gilbert MTP. Sinding MS, et al. Science. 2020 Jun 26;368(6498):1495-1499. doi: 10.1126/science.aaz8599. Science. 2020. PMID: 32587022 Free PMC article.
143 results