Liu XS - Search Results

1

Clonal tracing reveals diverse patterns of response to immune checkpoint blockade.

Gu SS, Wang X, Hu X, Jiang P, Li Z, Traugh N, Bu X, Tang Q, Wang C, Zeng Z, Fu J, Meyer C, Zhang Y, Cejas P, Lim K, Wang J, Zhang W, Tokheim C, Sahu AD, Xing X, Kroger B, Ouyang Z, Long H, Freeman GJ, Brown M, Liu XS. Gu SS, et al. Among authors: liu xs. Genome Biol. 2020 Oct 15;21(1):263. doi: 10.1186/s13059-020-02166-1. Genome Biol. 2020. PMID: 33059736 Free PMC article.

2

Model-based analysis of tiling-arrays for ChIP-chip.

Johnson WE, Li W, Meyer CA, Gottardo R, Carroll JS, Brown M, Liu XS. Johnson WE, et al. Among authors: liu xs. Proc Natl Acad Sci U S A. 2006 Aug 15;103(33):12457-62. doi: 10.1073/pnas.0601180103. Epub 2006 Aug 8. Proc Natl Acad Sci U S A. 2006. PMID: 16895995 Free PMC article.

3

A hierarchical network of transcription factors governs androgen receptor-dependent prostate cancer growth.

Wang Q, Li W, Liu XS, Carroll JS, Jänne OA, Keeton EK, Chinnaiyan AM, Pienta KJ, Brown M. Wang Q, et al. Among authors: liu xs. Mol Cell. 2007 Aug 3;27(3):380-92. doi: 10.1016/j.molcel.2007.05.041. Mol Cell. 2007. PMID: 17679089 Free PMC article.

4

FoxA1 translates epigenetic signatures into enhancer-driven lineage-specific transcription.

Lupien M, Eeckhoute J, Meyer CA, Wang Q, Zhang Y, Li W, Carroll JS, Liu XS, Brown M. Lupien M, et al. Among authors: liu xs. Cell. 2008 Mar 21;132(6):958-70. doi: 10.1016/j.cell.2008.01.018. Cell. 2008. PMID: 18358809 Free PMC article.

5

Model-based analysis of ChIP-Seq (MACS).

Zhang Y, Liu T, Meyer CA, Eeckhoute J, Johnson DS, Bernstein BE, Nusbaum C, Myers RM, Brown M, Li W, Liu XS. Zhang Y, et al. Among authors: liu xs, liu t. Genome Biol. 2008;9(9):R137. doi: 10.1186/gb-2008-9-9-r137. Epub 2008 Sep 17. Genome Biol. 2008. PMID: 18798982 Free PMC article.

6

Integrative analysis of HIF binding and transactivation reveals its role in maintaining histone methylation homeostasis.

Xia X, Lemieux ME, Li W, Carroll JS, Brown M, Liu XS, Kung AL. Xia X, et al. Among authors: liu xs. Proc Natl Acad Sci U S A. 2009 Mar 17;106(11):4260-5. doi: 10.1073/pnas.0810067106. Epub 2009 Mar 2. Proc Natl Acad Sci U S A. 2009. PMID: 19255431 Free PMC article.

7

Coactivator function defines the active estrogen receptor alpha cistrome.

Lupien M, Eeckhoute J, Meyer CA, Krum SA, Rhodes DR, Liu XS, Brown M. Lupien M, et al. Among authors: liu xs. Mol Cell Biol. 2009 Jun;29(12):3413-23. doi: 10.1128/MCB.00020-09. Epub 2009 Apr 13. Mol Cell Biol. 2009. PMID: 19364822 Free PMC article.

8

Growth factor stimulation induces a distinct ER(alpha) cistrome underlying breast cancer endocrine resistance.

Lupien M, Meyer CA, Bailey ST, Eeckhoute J, Cook J, Westerling T, Zhang X, Carroll JS, Rhodes DR, Liu XS, Brown M. Lupien M, et al. Among authors: liu xs. Genes Dev. 2010 Oct 1;24(19):2219-27. doi: 10.1101/gad.1944810. Genes Dev. 2010. PMID: 20889718 Free PMC article.

9

Differentiation-specific histone modifications reveal dynamic chromatin interactions and partners for the intestinal transcription factor CDX2.

Verzi MP, Shin H, He HH, Sulahian R, Meyer CA, Montgomery RK, Fleet JC, Brown M, Liu XS, Shivdasani RA. Verzi MP, et al. Among authors: liu xs. Dev Cell. 2010 Nov 16;19(5):713-26. doi: 10.1016/j.devcel.2010.10.006. Dev Cell. 2010. PMID: 21074721 Free PMC article.

10

BINOCh: binding inference from nucleosome occupancy changes.

Meyer CA, He HH, Brown M, Liu XS. Meyer CA, et al. Among authors: liu xs. Bioinformatics. 2011 Jul 1;27(13):1867-8. doi: 10.1093/bioinformatics/btr279. Epub 2011 May 5. Bioinformatics. 2011. PMID: 21551136 Free PMC article.

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