Baker D - Search Results

1

Preterm Infants Harbour a Rapidly Changing Mycobiota That Includes Candida Pathobionts.

A James S, Phillips S, Telatin A, Baker D, Ansorge R, Clarke P, J Hall L, R Carding S. A James S, et al. Among authors: baker d. J Fungi (Basel). 2020 Nov 9;6(4):273. doi: 10.3390/jof6040273. J Fungi (Basel). 2020. PMID: 33182444 Free PMC article.

2

TraDIS-Xpress: a high-resolution whole-genome assay identifies novel mechanisms of triclosan action and resistance.

Yasir M, Turner AK, Bastkowski S, Baker D, Page AJ, Telatin A, Phan MD, Monahan L, Savva GM, Darling A, Webber MA, Charles IG. Yasir M, et al. Among authors: baker d. Genome Res. 2020 Feb;30(2):239-249. doi: 10.1101/gr.254391.119. Epub 2020 Feb 12. Genome Res. 2020. PMID: 32051187 Free PMC article.

3

The Origin of Plasma-Derived Bacterial Extracellular Vesicles in Healthy Individuals and Patients with Inflammatory Bowel Disease: A Pilot Study.

Jones E, Stentz R, Telatin A, Savva GM, Booth C, Baker D, Rudder S, Knight SC, Noble A, Carding SR. Jones E, et al. Among authors: baker d. Genes (Basel). 2021 Oct 18;12(10):1636. doi: 10.3390/genes12101636. Genes (Basel). 2021. PMID: 34681030 Free PMC article.

4

Fecal microbiota transfer between young and aged mice reverses hallmarks of the aging gut, eye, and brain.

Parker A, Romano S, Ansorge R, Aboelnour A, Le Gall G, Savva GM, Pontifex MG, Telatin A, Baker D, Jones E, Vauzour D, Rudder S, Blackshaw LA, Jeffery G, Carding SR. Parker A, et al. Among authors: baker d. Microbiome. 2022 Apr 29;10(1):68. doi: 10.1186/s40168-022-01243-w. Microbiome. 2022. PMID: 35501923 Free PMC article.

5

Absence of Bacteria Permits Fungal Gut-To-Brain Translocation and Invasion in Germfree Mice but Ageing Alone Does Not Drive Pathobiont Expansion in Conventionally Raised Mice.

Parker A, James SA, Purse C, Brion A, Goldson A, Telatin A, Baker D, Carding SR. Parker A, et al. Among authors: baker d. Front Aging Neurosci. 2022 Jul 18;14:828429. doi: 10.3389/fnagi.2022.828429. eCollection 2022. Front Aging Neurosci. 2022. PMID: 35923548 Free PMC article.

6

The Cynomolgus Macaque Intestinal Mycobiome Is Dominated by the Kazachstania Genus and K. pintolopesii Species.

James SA, Parker A, Purse C, Telatin A, Baker D, Holmes S, Durham J, Funnell SGP, Carding SR. James SA, et al. Among authors: baker d. J Fungi (Basel). 2022 Oct 8;8(10):1054. doi: 10.3390/jof8101054. J Fungi (Basel). 2022. PMID: 36294619 Free PMC article.

7

A hybrid and poly-polish workflow for the complete and accurate assembly of phage genomes: a case study of ten przondoviruses.

Elek CKA, Brown TL, Le Viet T, Evans R, Baker DJ, Telatin A, Tiwari SK, Al-Khanaq H, Thilliez G, Kingsley RA, Hall LJ, Webber MA, Adriaenssens EM. Elek CKA, et al. Microb Genom. 2023 Jul;9(7):mgen001065. doi: 10.1099/mgen.0.001065. Microb Genom. 2023. PMID: 37463032 Free PMC article.

8

Extensive microbial diversity within the chicken gut microbiome revealed by metagenomics and culture.

Gilroy R, Ravi A, Getino M, Pursley I, Horton DL, Alikhan NF, Baker D, Gharbi K, Hall N, Watson M, Adriaenssens EM, Foster-Nyarko E, Jarju S, Secka A, Antonio M, Oren A, Chaudhuri RR, La Ragione R, Hildebrand F, Pallen MJ. Gilroy R, et al. Among authors: baker d. PeerJ. 2021 Apr 6;9:e10941. doi: 10.7717/peerj.10941. eCollection 2021. PeerJ. 2021. PMID: 33868800 Free PMC article.

9

Intestinal Microbiome-Macrophage Crosstalk Contributes to Cholestatic Liver Disease by Promoting Intestinal Permeability in Mice.

Isaacs-Ten A, Echeandia M, Moreno-Gonzalez M, Brion A, Goldson A, Philo M, Patterson AM, Parker A, Galduroz M, Baker D, Rushbrook SM, Hildebrand F, Beraza N. Isaacs-Ten A, et al. Among authors: baker d. Hepatology. 2020 Dec;72(6):2090-2108. doi: 10.1002/hep.31228. Hepatology. 2020. PMID: 32168395 Free PMC article.

10

Large-scale sequencing of SARS-CoV-2 genomes from one region allows detailed epidemiology and enables local outbreak management.

Page AJ, Mather AE, Le-Viet T, Meader EJ, Alikhan NF, Kay GL, de Oliveira Martins L, Aydin A, Baker DJ, Trotter AJ, Rudder S, Tedim AP, Kolyva A, Stanley R, Yasir M, Diaz M, Potter W, Stuart C, Meadows L, Bell A, Gutierrez AV, Thomson NM, Adriaenssens EM, Swingler T, Gilroy RAJ, Griffith L, Sethi DK, Aggarwal D, Brown CS, Davidson RK, Kingsley RA, Bedford L, Coupland LJ, Charles IG, Elumogo N, Wain J, Prakash R, Webber MA, Smith SJL, Chand M, Dervisevic S, O'Grady J, The Covid-Genomics Uk Cog-Uk Consortium. Page AJ, et al. Among authors: baker dj. Microb Genom. 2021 Jun;7(6):000589. doi: 10.1099/mgen.0.000589. Microb Genom. 2021. PMID: 34184982 Free PMC article.

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