Uhler JP - Search Results

1

Accurate mapping of mitochondrial DNA deletions and duplications using deep sequencing.

Basu S, Xie X, Uhler JP, Hedberg-Oldfors C, Milenkovic D, Baris OR, Kimoloi S, Matic S, Stewart JB, Larsson NG, Wiesner RJ, Oldfors A, Gustafsson CM, Falkenberg M, Larsson E. Basu S, et al. Among authors: uhler jp. PLoS Genet. 2020 Dec 14;16(12):e1009242. doi: 10.1371/journal.pgen.1009242. eCollection 2020 Dec. PLoS Genet. 2020. PMID: 33315859 Free PMC article.

2

G-quadruplex structures in RNA stimulate mitochondrial transcription termination and primer formation.

Wanrooij PH, Uhler JP, Simonsson T, Falkenberg M, Gustafsson CM. Wanrooij PH, et al. Among authors: uhler jp. Proc Natl Acad Sci U S A. 2010 Sep 14;107(37):16072-7. doi: 10.1073/pnas.1006026107. Epub 2010 Aug 26. Proc Natl Acad Sci U S A. 2010. PMID: 20798345 Free PMC article.

3

A hybrid G-quadruplex structure formed between RNA and DNA explains the extraordinary stability of the mitochondrial R-loop.

Wanrooij PH, Uhler JP, Shi Y, Westerlund F, Falkenberg M, Gustafsson CM. Wanrooij PH, et al. Among authors: uhler jp. Nucleic Acids Res. 2012 Nov 1;40(20):10334-44. doi: 10.1093/nar/gks802. Epub 2012 Sep 10. Nucleic Acids Res. 2012. PMID: 22965135 Free PMC article.

4

The UbL protein UBTD1 stably interacts with the UBE2D family of E2 ubiquitin conjugating enzymes.

Uhler JP, Spåhr H, Farge G, Clavel S, Larsson NG, Falkenberg M, Samuelsson T, Gustafsson CM. Uhler JP, et al. Biochem Biophys Res Commun. 2014 Jan 3;443(1):7-12. doi: 10.1016/j.bbrc.2013.10.137. Epub 2013 Nov 6. Biochem Biophys Res Commun. 2014. PMID: 24211586

5

The exonuclease activity of DNA polymerase γ is required for ligation during mitochondrial DNA replication.

Macao B, Uhler JP, Siibak T, Zhu X, Shi Y, Sheng W, Olsson M, Stewart JB, Gustafsson CM, Falkenberg M. Macao B, et al. Among authors: uhler jp. Nat Commun. 2015 Jun 22;6:7303. doi: 10.1038/ncomms8303. Nat Commun. 2015. PMID: 26095671 Free PMC article.

6

Regulation of DNA replication at the end of the mitochondrial D-loop involves the helicase TWINKLE and a conserved sequence element.

Jemt E, Persson Ö, Shi Y, Mehmedovic M, Uhler JP, Dávila López M, Freyer C, Gustafsson CM, Samuelsson T, Falkenberg M. Jemt E, et al. Among authors: uhler jp. Nucleic Acids Res. 2015 Oct 30;43(19):9262-75. doi: 10.1093/nar/gkv804. Epub 2015 Aug 7. Nucleic Acids Res. 2015. PMID: 26253742 Free PMC article.

7

Primer removal during mammalian mitochondrial DNA replication.

Uhler JP, Falkenberg M. Uhler JP, et al. DNA Repair (Amst). 2015 Oct;34:28-38. doi: 10.1016/j.dnarep.2015.07.003. Epub 2015 Aug 12. DNA Repair (Amst). 2015. PMID: 26303841 Free article. Review.

8

MGME1 processes flaps into ligatable nicks in concert with DNA polymerase γ during mtDNA replication.

Uhler JP, Thörn C, Nicholls TJ, Matic S, Milenkovic D, Gustafsson CM, Falkenberg M. Uhler JP, et al. Nucleic Acids Res. 2016 Jul 8;44(12):5861-71. doi: 10.1093/nar/gkw468. Epub 2016 May 24. Nucleic Acids Res. 2016. PMID: 27220468 Free PMC article.

9

Mice lacking the mitochondrial exonuclease MGME1 accumulate mtDNA deletions without developing progeria.

Matic S, Jiang M, Nicholls TJ, Uhler JP, Dirksen-Schwanenland C, Polosa PL, Simard ML, Li X, Atanassov I, Rackham O, Filipovska A, Stewart JB, Falkenberg M, Larsson NG, Milenkovic D. Matic S, et al. Among authors: uhler jp. Nat Commun. 2018 Mar 23;9(1):1202. doi: 10.1038/s41467-018-03552-x. Nat Commun. 2018. PMID: 29572490 Free PMC article.

10

A two-nuclease pathway involving RNase H1 is required for primer removal at human mitochondrial OriL.

Al-Behadili A, Uhler JP, Berglund AK, Peter B, Doimo M, Reyes A, Wanrooij S, Zeviani M, Falkenberg M. Al-Behadili A, et al. Among authors: uhler jp. Nucleic Acids Res. 2018 Oct 12;46(18):9471-9483. doi: 10.1093/nar/gky708. Nucleic Acids Res. 2018. PMID: 30102370 Free PMC article.

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