Stanton RV - Search Results

1

PFRED: A computational platform for siRNA and antisense oligonucleotides design.

Sciabola S, Xi H, Cruz D, Cao Q, Lawrence C, Zhang T, Rotstein S, Hughes JD, Caffrey DR, Stanton RV. Sciabola S, et al. Among authors: stanton rv. PLoS One. 2021 Jan 22;16(1):e0238753. doi: 10.1371/journal.pone.0238753. eCollection 2021. PLoS One. 2021. PMID: 33481821 Free PMC article.

2

Application of Free-Wilson selectivity analysis for combinatorial library design.

Sciabola S, Stanton RV, Johnson TL, Xi H. Sciabola S, et al. Among authors: stanton rv. Methods Mol Biol. 2011;685:91-109. doi: 10.1007/978-1-60761-931-4_5. Methods Mol Biol. 2011. PMID: 20981520

3

HELM: a hierarchical notation language for complex biomolecule structure representation.

Zhang T, Li H, Xi H, Stanton RV, Rotstein SH. Zhang T, et al. Among authors: stanton rv. J Chem Inf Model. 2012 Oct 22;52(10):2796-806. doi: 10.1021/ci3001925. Epub 2012 Sep 26. J Chem Inf Model. 2012. PMID: 22947017

4

Improved nucleic acid descriptors for siRNA efficacy prediction.

Sciabola S, Cao Q, Orozco M, Faustino I, Stanton RV. Sciabola S, et al. Among authors: stanton rv. Nucleic Acids Res. 2013 Feb 1;41(3):1383-94. doi: 10.1093/nar/gks1191. Epub 2012 Dec 14. Nucleic Acids Res. 2013. PMID: 23241392 Free PMC article.

5

Chemical modification study of antisense gapmers.

Stanton R, Sciabola S, Salatto C, Weng Y, Moshinsky D, Little J, Walters E, Kreeger J, DiMattia D, Chen T, Clark T, Liu M, Qian J, Roy M, Dullea R. Stanton R, et al. Nucleic Acid Ther. 2012 Oct;22(5):344-59. doi: 10.1089/nat.2012.0366. Epub 2012 Aug 1. Nucleic Acid Ther. 2012. PMID: 22852836

6

Study of CRTC2 pharmacology using antisense oligonuceotides.

Dullea R, Salatto C, Sciabola S, Chen T, Dimattia D, Gandhok H, Kreeger J, Weng Y, Clark T, Vage C, Stanton R. Dullea R, et al. Nucleic Acid Ther. 2014 Apr;24(2):127-38. doi: 10.1089/nat.2013.0456. Epub 2013 Dec 31. Nucleic Acid Ther. 2014. PMID: 24380393

7

Roadmap for the use of base editors to decipher drug mechanism of action.

Aparicio-Prat E, Yan D, Mariotti M, Bassik M, Hess G, Fortin JP, Weston A, Xi HS, Stanton R. Aparicio-Prat E, et al. PLoS One. 2021 Sep 21;16(9):e0257537. doi: 10.1371/journal.pone.0257537. eCollection 2021. PLoS One. 2021. PMID: 34547052 Free PMC article.

8

Sequence motifs associated with hepatotoxicity of locked nucleic acid--modified antisense oligonucleotides.

Burdick AD, Sciabola S, Mantena SR, Hollingshead BD, Stanton R, Warneke JA, Zeng M, Martsen E, Medvedev A, Makarov SS, Reed LA, Davis JW 2nd, Whiteley LO. Burdick AD, et al. Nucleic Acids Res. 2014 Apr;42(8):4882-91. doi: 10.1093/nar/gku142. Epub 2014 Feb 18. Nucleic Acids Res. 2014. PMID: 24550163 Free PMC article.

9

3'Pool-seq: an optimized cost-efficient and scalable method of whole-transcriptome gene expression profiling.

Sholder G, Lanz TA, Moccia R, Quan J, Aparicio-Prat E, Stanton R, Xi HS. Sholder G, et al. BMC Genomics. 2020 Jan 20;21(1):64. doi: 10.1186/s12864-020-6478-3. BMC Genomics. 2020. PMID: 31959126 Free PMC article.

10

High-throughput virtual screening of proteins using GRID molecular interaction fields.

Sciabola S, Stanton RV, Mills JE, Flocco MM, Baroni M, Cruciani G, Perruccio F, Mason JS. Sciabola S, et al. Among authors: stanton rv. J Chem Inf Model. 2010 Jan;50(1):155-69. doi: 10.1021/ci9003317. J Chem Inf Model. 2010. PMID: 19919042

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