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Quantifying the effect of experimental perturbations at single-cell resolution.
Burkhardt DB, Stanley JS 3rd, Tong A, Perdigoto AL, Gigante SA, Herold KC, Wolf G, Giraldez AJ, van Dijk D, Krishnaswamy S. Burkhardt DB, et al. Among authors: tong a. Nat Biotechnol. 2021 May;39(5):619-629. doi: 10.1038/s41587-020-00803-5. Epub 2021 Feb 8. Nat Biotechnol. 2021. PMID: 33558698 Free PMC article.
Interpretable Neuron Structuring with Graph Spectral Regularization.
Tong A, van Dijk D, Stanley JS 3rd, Amodio M, Yim K, Muhle R, Noonan J, Wolf G, Krishnaswamy S. Tong A, et al. Adv Intell Data Anal. 2020 Apr;12080:509-521. doi: 10.1007/978-3-030-44584-3_40. Epub 2020 Apr 22. Adv Intell Data Anal. 2020. PMID: 34131660 Free PMC article.
Multiscale PHATE identifies multimodal signatures of COVID-19.
Kuchroo M, Huang J, Wong P, Grenier JC, Shung D, Tong A, Lucas C, Klein J, Burkhardt DB, Gigante S, Godavarthi A, Rieck B, Israelow B, Simonov M, Mao T, Oh JE, Silva J, Takahashi T, Odio CD, Casanovas-Massana A, Fournier J; Yale IMPACT Team; Farhadian S, Dela Cruz CS, Ko AI, Hirn MJ, Wilson FP, Hussin JG, Wolf G, Iwasaki A, Krishnaswamy S. Kuchroo M, et al. Among authors: tong a. Nat Biotechnol. 2022 May;40(5):681-691. doi: 10.1038/s41587-021-01186-x. Epub 2022 Feb 28. Nat Biotechnol. 2022. PMID: 35228707 Free PMC article.
MULTIMODAL DATA VISUALIZATION AND DENOISING WITH INTEGRATED DIFFUSION.
Kuchroo M, Godavarthi A, Tong A, Wolf G, Krishnaswamy S. Kuchroo M, et al. Among authors: tong a. IEEE Int Workshop Mach Learn Signal Process. 2021 Oct;2021:10.1109/mlsp52302.2021.9596214. doi: 10.1109/mlsp52302.2021.9596214. Epub 2021 Nov 15. IEEE Int Workshop Mach Learn Signal Process. 2021. PMID: 35340810 Free PMC article.
Immune cells and their inflammatory mediators modify β cells and cause checkpoint inhibitor-induced diabetes.
Perdigoto AL, Deng S, Du KC, Kuchroo M, Burkhardt DB, Tong A, Israel G, Robert ME, Weisberg SP, Kirkiles-Smith N, Stamatouli AM, Kluger HM, Quandt Z, Young A, Yang ML, Mamula MJ, Pober JS, Anderson MS, Krishnaswamy S, Herold KC. Perdigoto AL, et al. Among authors: tong a. JCI Insight. 2022 Sep 8;7(17):e156330. doi: 10.1172/jci.insight.156330. JCI Insight. 2022. PMID: 35925682 Free PMC article.
EMBEDDING SIGNALS ON GRAPHS WITH UNBALANCED DIFFUSION EARTH MOVER'S DISTANCE.
Tong A, Huguet G, Shung D, Natik A, Kuchroo M, Lajoie G, Wolf G, Krishnaswamy S. Tong A, et al. Proc IEEE Int Conf Acoust Speech Signal Process. 2022 May;2022:5647-5651. doi: 10.1109/icassp43922.2022.9746556. Epub 2022 Apr 27. Proc IEEE Int Conf Acoust Speech Signal Process. 2022. PMID: 36628172 Free PMC article.
DATA-DRIVEN LEARNING OF GEOMETRIC SCATTERING MODULES FOR GNNS.
Tong A, Wenkel F, Macdonald K, Krishnaswamy S, Wolf G. Tong A, et al. IEEE Int Workshop Mach Learn Signal Process. 2021 Oct;2021:10.1109/mlsp52302.2021.9596169. doi: 10.1109/mlsp52302.2021.9596169. Epub 2021 Nov 15. IEEE Int Workshop Mach Learn Signal Process. 2021. PMID: 36945315 Free PMC article.
Single-cell analysis reveals inflammatory interactions driving macular degeneration.
Kuchroo M, DiStasio M, Song E, Calapkulu E, Zhang L, Ige M, Sheth AH, Majdoubi A, Menon M, Tong A, Godavarthi A, Xing Y, Gigante S, Steach H, Huang J, Huguet G, Narain J, You K, Mourgkos G, Dhodapkar RM, Hirn MJ, Rieck B, Wolf G, Krishnaswamy S, Hafler BP. Kuchroo M, et al. Among authors: tong a. Nat Commun. 2023 May 5;14(1):2589. doi: 10.1038/s41467-023-37025-7. Nat Commun. 2023. PMID: 37147305 Free PMC article.
1,538 results