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Page 1
Barcoded oligonucleotides ligated on RNA amplified for multiplexed and parallel in situ analyses.
Liu S, Punthambaker S, Iyer EPR, Ferrante T, Goodwin D, Fürth D, Pawlowski AC, Jindal K, Tam JM, Mifflin L, Alon S, Sinha A, Wassie AT, Chen F, Cheng A, Willocq V, Meyer K, Ling KH, Camplisson CK, Kohman RE, Aach J, Lee JH, Yankner BA, Boyden ES, Church GM. Liu S, et al. Among authors: wassie at. Nucleic Acids Res. 2021 Jun 4;49(10):e58. doi: 10.1093/nar/gkab120. Nucleic Acids Res. 2021. PMID: 33693773 Free PMC article.
Nanoscale imaging of RNA with expansion microscopy.
Chen F, Wassie AT, Cote AJ, Sinha A, Alon S, Asano S, Daugharthy ER, Chang JB, Marblestone A, Church GM, Raj A, Boyden ES. Chen F, et al. Among authors: wassie at. Nat Methods. 2016 Aug;13(8):679-84. doi: 10.1038/nmeth.3899. Epub 2016 Jul 4. Nat Methods. 2016. PMID: 27376770 Free PMC article.
Iterative expansion microscopy.
Chang JB, Chen F, Yoon YG, Jung EE, Babcock H, Kang JS, Asano S, Suk HJ, Pak N, Tillberg PW, Wassie AT, Cai D, Boyden ES. Chang JB, et al. Among authors: wassie at. Nat Methods. 2017 Jun;14(6):593-599. doi: 10.1038/nmeth.4261. Epub 2017 Apr 17. Nat Methods. 2017. PMID: 28417997 Free PMC article.
Expansion microscopy of C. elegans.
Yu CJ, Barry NC, Wassie AT, Sinha A, Bhattacharya A, Asano S, Zhang C, Chen F, Hobert O, Goodman MB, Haspel G, Boyden ES. Yu CJ, et al. Among authors: wassie at. Elife. 2020 May 1;9:e46249. doi: 10.7554/eLife.46249. Elife. 2020. PMID: 32356725 Free PMC article.
Spatial Multiplexing of Fluorescent Reporters for Imaging Signaling Network Dynamics.
Linghu C, Johnson SL, Valdes PA, Shemesh OA, Park WM, Park D, Piatkevich KD, Wassie AT, Liu Y, An B, Barnes SA, Celiker OT, Yao CC, Yu CJ, Wang R, Adamala KP, Bear MF, Keating AE, Boyden ES. Linghu C, et al. Among authors: wassie at. Cell. 2020 Dec 10;183(6):1682-1698.e24. doi: 10.1016/j.cell.2020.10.035. Epub 2020 Nov 23. Cell. 2020. PMID: 33232692 Free PMC article.
Expansion sequencing: Spatially precise in situ transcriptomics in intact biological systems.
Alon S, Goodwin DR, Sinha A, Wassie AT, Chen F, Daugharthy ER, Bando Y, Kajita A, Xue AG, Marrett K, Prior R, Cui Y, Payne AC, Yao CC, Suk HJ, Wang R, Yu CJ, Tillberg P, Reginato P, Pak N, Liu S, Punthambaker S, Iyer EPR, Kohman RE, Miller JA, Lein ES, Lako A, Cullen N, Rodig S, Helvie K, Abravanel DL, Wagle N, Johnson BE, Klughammer J, Slyper M, Waldman J, Jané-Valbuena J, Rozenblatt-Rosen O, Regev A; IMAXT Consortium; Church GM, Marblestone AH, Boyden ES. Alon S, et al. Among authors: wassie at. Science. 2021 Jan 29;371(6528):eaax2656. doi: 10.1126/science.aax2656. Science. 2021. PMID: 33509999 Free PMC article.
Post-transcriptional splicing can occur in a slow-moving zone around the gene.
Coté A, O'Farrell A, Dardani I, Dunagin M, Coté C, Wan Y, Bayatpour S, Drexler HL, Alexander KA, Chen F, Wassie AT, Patel R, Pham K, Boyden ES, Berger S, Phillips-Cremins J, Churchman LS, Raj A. Coté A, et al. Among authors: wassie at. Elife. 2024 Apr 5;12:RP91357. doi: 10.7554/eLife.91357. Elife. 2024. PMID: 38577979 Free PMC article.
18 results