Duren Z - Search Results

1

MIMIC: an optimization method to identify cell type-specific marker panel for cell sorting.

Zou M, Duren Z, Yuan Q, Li H, Hutchins AP, Wong WH, Wang Y. Zou M, et al. Among authors: duren z. Brief Bioinform. 2021 Nov 5;22(6):bbab235. doi: 10.1093/bib/bbab235. Brief Bioinform. 2021. PMID: 34180954 Free PMC article.

2

DC3 is a method for deconvolution and coupled clustering from bulk and single-cell genomics data.

Zeng W, Chen X, Duren Z, Wang Y, Jiang R, Wong WH. Zeng W, et al. Among authors: duren z. Nat Commun. 2019 Oct 10;10(1):4613. doi: 10.1038/s41467-019-12547-1. Nat Commun. 2019. PMID: 31601804 Free PMC article.

3

Time course regulatory analysis based on paired expression and chromatin accessibility data.

Duren Z, Chen X, Xin J, Wang Y, Wong WH. Duren Z, et al. Genome Res. 2020 Apr;30(4):622-634. doi: 10.1101/gr.257063.119. Epub 2020 Mar 18. Genome Res. 2020. PMID: 32188700 Free PMC article.

4

GuidingNet: revealing transcriptional cofactor and predicting binding for DNA methyltransferase by network regularization.

Ren L, Gao C, Duren Z, Wang Y. Ren L, et al. Among authors: duren z. Brief Bioinform. 2021 Jul 20;22(4):bbaa245. doi: 10.1093/bib/bbaa245. Brief Bioinform. 2021. PMID: 33048117 Free PMC article.

5

A systematic method to identify modulation of transcriptional regulation via chromatin activity reveals regulatory network during mESC differentiation.

Duren Z, Wang Y. Duren Z, et al. Sci Rep. 2016 Mar 7;6:22656. doi: 10.1038/srep22656. Sci Rep. 2016. PMID: 26949222 Free PMC article.

6

Modeling gene regulation from paired expression and chromatin accessibility data.

Duren Z, Chen X, Jiang R, Wang Y, Wong WH. Duren Z, et al. Proc Natl Acad Sci U S A. 2017 Jun 20;114(25):E4914-E4923. doi: 10.1073/pnas.1704553114. Epub 2017 Jun 2. Proc Natl Acad Sci U S A. 2017. PMID: 28576882 Free PMC article.

7

Integrative analysis of single-cell genomics data by coupled nonnegative matrix factorizations.

Duren Z, Chen X, Zamanighomi M, Zeng W, Satpathy AT, Chang HY, Wang Y, Wong WH. Duren Z, et al. Proc Natl Acad Sci U S A. 2018 Jul 24;115(30):7723-7728. doi: 10.1073/pnas.1805681115. Epub 2018 Jul 9. Proc Natl Acad Sci U S A. 2018. PMID: 29987051 Free PMC article.

8

A method for scoring the cell type-specific impacts of noncoding variants in personal genomes.

Li W, Duren Z, Jiang R, Wong WH. Li W, et al. Among authors: duren z. Proc Natl Acad Sci U S A. 2020 Sep 1;117(35):21364-21372. doi: 10.1073/pnas.1922703117. Epub 2020 Aug 17. Proc Natl Acad Sci U S A. 2020. PMID: 32817564 Free PMC article.

9

Chromatin accessibility landscape and regulatory network of high-altitude hypoxia adaptation.

Xin J, Zhang H, He Y, Duren Z, Bai C, Chen L, Luo X, Yan DS, Zhang C, Zhu X, Yuan Q, Feng Z, Cui C, Qi X, Ouzhuluobu, Wong WH, Wang Y, Su B. Xin J, et al. Among authors: duren z. Nat Commun. 2020 Oct 1;11(1):4928. doi: 10.1038/s41467-020-18638-8. Nat Commun. 2020. PMID: 33004791 Free PMC article.

10

hReg-CNCC reconstructs a regulatory network in human cranial neural crest cells and annotates variants in a developmental context.

Feng Z, Duren Z, Xiong Z, Wang S, Liu F, Wong WH, Wang Y. Feng Z, et al. Among authors: duren z. Commun Biol. 2021 Apr 6;4(1):442. doi: 10.1038/s42003-021-01970-0. Commun Biol. 2021. PMID: 33824393 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Article Language

Species

Sex

Age

Other

27 results

Search Page

Filters