Zack DJ - Search Results

1

Large-scale phenotypic drug screen identifies neuroprotectants in zebrafish and mouse models of retinitis pigmentosa.

Zhang L, Chen C, Fu J, Lilley B, Berlinicke C, Hansen B, Ding D, Wang G, Wang T, Shou D, Ye Y, Mulligan T, Emmerich K, Saxena MT, Hall KR, Sharrock AV, Brandon C, Park H, Kam TI, Dawson VL, Dawson TM, Shim JS, Hanes J, Ji H, Liu JO, Qian J, Ackerley DF, Rohrer B, Zack DJ, Mumm JS. Zhang L, et al. Among authors: zack dj. Elife. 2021 Jun 29;10:e57245. doi: 10.7554/eLife.57245. Elife. 2021. PMID: 34184634 Free PMC article.

2

Gene expression profiling of purified rat retinal ganglion cells.

Farkas RH, Qian J, Goldberg JL, Quigley HA, Zack DJ. Farkas RH, et al. Among authors: zack dj. Invest Ophthalmol Vis Sci. 2004 Aug;45(8):2503-13. doi: 10.1167/iovs.03-1391. Invest Ophthalmol Vis Sci. 2004. PMID: 15277470

3

Identification of gene expression changes associated with the progression of retinal degeneration in the rd1 mouse.

Hackam AS, Strom R, Liu D, Qian J, Wang C, Otteson D, Gunatilaka T, Farkas RH, Chowers I, Kageyama M, Leveillard T, Sahel JA, Campochiaro PA, Parmigiani G, Zack DJ. Hackam AS, et al. Among authors: zack dj. Invest Ophthalmol Vis Sci. 2004 Sep;45(9):2929-42. doi: 10.1167/iovs.03-1184. Invest Ophthalmol Vis Sci. 2004. PMID: 15326104 Free article.

4

Comparative gene expression analysis of murine retina and brain.

Hackam AS, Qian J, Liu D, Gunatilaka T, Farkas RH, Chowers I, Kageyama M, Parmigiani G, Zack DJ. Hackam AS, et al. Among authors: zack dj. Mol Vis. 2004 Aug 31;10:637-49. Mol Vis. 2004. PMID: 15359217 Free article.

5

Identification of regulatory targets of tissue-specific transcription factors: application to retina-specific gene regulation.

Qian J, Esumi N, Chen Y, Wang Q, Chowers I, Zack DJ. Qian J, et al. Among authors: zack dj. Nucleic Acids Res. 2005 Jun 20;33(11):3479-91. doi: 10.1093/nar/gki658. Print 2005. Nucleic Acids Res. 2005. PMID: 15967807 Free PMC article.

6

Genome-wide prediction and characterization of interactions between transcription factors in Saccharomyces cerevisiae.

Yu X, Lin J, Masuda T, Esumi N, Zack DJ, Qian J. Yu X, et al. Among authors: zack dj. Nucleic Acids Res. 2006 Feb 6;34(3):917-27. doi: 10.1093/nar/gkj487. Print 2006. Nucleic Acids Res. 2006. PMID: 16464824 Free PMC article.

7

Characterization of binding sites of eukaryotic transcription factors.

Qian J, Lin J, Zack DJ. Qian J, et al. Among authors: zack dj. Genomics Proteomics Bioinformatics. 2006 May;4(2):67-79. doi: 10.1016/S1672-0229(06)60019-3. Genomics Proteomics Bioinformatics. 2006. PMID: 16970547 Free PMC article.

8

Computational analysis of tissue-specific combinatorial gene regulation: predicting interaction between transcription factors in human tissues.

Yu X, Lin J, Zack DJ, Qian J. Yu X, et al. Among authors: zack dj. Nucleic Acids Res. 2006;34(17):4925-36. doi: 10.1093/nar/gkl595. Epub 2006 Sep 18. Nucleic Acids Res. 2006. PMID: 16982645 Free PMC article.

9

Identification of tissue-specific cis-regulatory modules based on interactions between transcription factors.

Yu X, Lin J, Zack DJ, Qian J. Yu X, et al. Among authors: zack dj. BMC Bioinformatics. 2007 Nov 9;8:437. doi: 10.1186/1471-2105-8-437. BMC Bioinformatics. 2007. PMID: 17996093 Free PMC article.

10

Changes in gene expression in experimental glaucoma and optic nerve transection: the equilibrium between protective and detrimental mechanisms.

Yang Z, Quigley HA, Pease ME, Yang Y, Qian J, Valenta D, Zack DJ. Yang Z, et al. Among authors: zack dj. Invest Ophthalmol Vis Sci. 2007 Dec;48(12):5539-48. doi: 10.1167/iovs.07-0542. Invest Ophthalmol Vis Sci. 2007. PMID: 18055803

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