DeGiorgio M - Search Results

1

Selection and thermostability suggest G-quadruplexes are novel functional elements of the human genome.

Guiblet WM, DeGiorgio M, Cheng X, Chiaromonte F, Eckert KA, Huang YF, Makova KD. Guiblet WM, et al. Among authors: degiorgio m. Genome Res. 2021 Jul;31(7):1136-1149. doi: 10.1101/gr.269589.120. Epub 2021 Jun 29. Genome Res. 2021. PMID: 34187812 Free PMC article.

2

Reverse Transcription Errors and RNA-DNA Differences at Short Tandem Repeats.

Fungtammasan A, Tomaszkiewicz M, Campos-Sánchez R, Eckert KA, DeGiorgio M, Makova KD. Fungtammasan A, et al. Among authors: degiorgio m. Mol Biol Evol. 2016 Oct;33(10):2744-58. doi: 10.1093/molbev/msw139. Epub 2016 Jul 12. Mol Biol Evol. 2016. PMID: 27413049 Free PMC article.

3

Fast and robust detection of ancestral selective sweeps.

Cheng X, Xu C, DeGiorgio M. Cheng X, et al. Among authors: degiorgio m. Mol Ecol. 2017 Dec;26(24):6871-6891. doi: 10.1111/mec.14416. Epub 2017 Dec 12. Mol Ecol. 2017. PMID: 29113018

4

High Levels of Copy Number Variation of Ampliconic Genes across Major Human Y Haplogroups.

Ye D, Zaidi AA, Tomaszkiewicz M, Anthony K, Liebowitz C, DeGiorgio M, Shriver MD, Makova KD. Ye D, et al. Among authors: degiorgio m. Genome Biol Evol. 2018 May 1;10(5):1333-1350. doi: 10.1093/gbe/evy086. Genome Biol Evol. 2018. PMID: 29718380 Free PMC article.

5

Detection of Shared Balancing Selection in the Absence of Trans-Species Polymorphism.

Cheng X, DeGiorgio M. Cheng X, et al. Among authors: degiorgio m. Mol Biol Evol. 2019 Jan 1;36(1):177-199. doi: 10.1093/molbev/msy202. Mol Biol Evol. 2019. PMID: 30380122 Free PMC article.

6

Ampliconic Genes on the Great Ape Y Chromosomes: Rapid Evolution of Copy Number but Conservation of Expression Levels.

Vegesna R, Tomaszkiewicz M, Ryder OA, Campos-Sánchez R, Medvedev P, DeGiorgio M, Makova KD. Vegesna R, et al. Among authors: degiorgio m. Genome Biol Evol. 2020 Jun 1;12(6):842-859. doi: 10.1093/gbe/evaa088. Genome Biol Evol. 2020. PMID: 32374870 Free PMC article.

7

Flexible Mixture Model Approaches That Accommodate Footprint Size Variability for Robust Detection of Balancing Selection.

Cheng X, DeGiorgio M. Cheng X, et al. Among authors: degiorgio m. Mol Biol Evol. 2020 Nov 1;37(11):3267-3291. doi: 10.1093/molbev/msaa134. Mol Biol Evol. 2020. PMID: 32462188 Free PMC article.

8

VolcanoFinder: Genomic scans for adaptive introgression.

Setter D, Mousset S, Cheng X, Nielsen R, DeGiorgio M, Hermisson J. Setter D, et al. Among authors: degiorgio m. PLoS Genet. 2020 Jun 18;16(6):e1008867. doi: 10.1371/journal.pgen.1008867. eCollection 2020 Jun. PLoS Genet. 2020. PMID: 32555579 Free PMC article.

9

Learning the properties of adaptive regions with functional data analysis.

Mughal MR, Koch H, Huang J, Chiaromonte F, DeGiorgio M. Mughal MR, et al. Among authors: degiorgio m. PLoS Genet. 2020 Aug 27;16(8):e1008896. doi: 10.1371/journal.pgen.1008896. eCollection 2020 Aug. PLoS Genet. 2020. PMID: 32853200 Free PMC article.

10

BalLeRMix +: mixture model approaches for robust joint identification of both positive selection and long-term balancing selection.

Cheng X, DeGiorgio M. Cheng X, et al. Among authors: degiorgio m. Bioinformatics. 2022 Jan 12;38(3):861-863. doi: 10.1093/bioinformatics/btab720. Bioinformatics. 2022. PMID: 34664624 Free PMC article.

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