Albaradei S - Search Results

1

DTi2Vec: Drug-target interaction prediction using network embedding and ensemble learning.

Thafar MA, Olayan RS, Albaradei S, Bajic VB, Gojobori T, Essack M, Gao X. Thafar MA, et al. Among authors: albaradei s. J Cheminform. 2021 Sep 22;13(1):71. doi: 10.1186/s13321-021-00552-w. J Cheminform. 2021. PMID: 34551818 Free PMC article.

2

Hybrid model for efficient prediction of poly(A) signals in human genomic DNA.

Albalawi F, Chahid A, Guo X, Albaradei S, Magana-Mora A, Jankovic BR, Uludag M, Van Neste C, Essack M, Laleg-Kirati TM, Bajic VB. Albalawi F, et al. Among authors: albaradei s. Methods. 2019 Aug 15;166:31-39. doi: 10.1016/j.ymeth.2019.04.001. Epub 2019 Apr 13. Methods. 2019. PMID: 30991099 Free article.

3

Comparison Study of Computational Prediction Tools for Drug-Target Binding Affinities.

Thafar M, Raies AB, Albaradei S, Essack M, Bajic VB. Thafar M, et al. Among authors: albaradei s. Front Chem. 2019 Nov 20;7:782. doi: 10.3389/fchem.2019.00782. eCollection 2019. Front Chem. 2019. PMID: 31824921 Free PMC article. Review.

4

Splice2Deep: An ensemble of deep convolutional neural networks for improved splice site prediction in genomic DNA.

Albaradei S, Magana-Mora A, Thafar M, Uludag M, Bajic VB, Gojobori T, Essack M, Jankovic BR. Albaradei S, et al. Gene X. 2020 May 13;5:100035. doi: 10.1016/j.gene.2020.100035. eCollection 2020 Dec. Gene X. 2020. PMID: 32550561 Free PMC article.

5

DTiGEMS+: drug-target interaction prediction using graph embedding, graph mining, and similarity-based techniques.

Thafar MA, Olayan RS, Ashoor H, Albaradei S, Bajic VB, Gao X, Gojobori T, Essack M. Thafar MA, et al. Among authors: albaradei s. J Cheminform. 2020 Jun 29;12(1):44. doi: 10.1186/s13321-020-00447-2. J Cheminform. 2020. PMID: 33431036 Free PMC article.

6

MetaCancer: A deep learning-based pan-cancer metastasis prediction model developed using multi-omics data.

Albaradei S, Napolitano F, Thafar MA, Gojobori T, Essack M, Gao X. Albaradei S, et al. Comput Struct Biotechnol J. 2021 Aug 9;19:4404-4411. doi: 10.1016/j.csbj.2021.08.006. eCollection 2021. Comput Struct Biotechnol J. 2021. PMID: 34429856 Free PMC article.

7

Splice2Deep: An ensemble of deep convolutional neural networks for improved splice site prediction in genomic DNA.

Albaradei S, Magana-Mora A, Thafar M, Uludag M, Bajic VB, Gojobori T, Essack M, Jankovic BR. Albaradei S, et al. Gene. 2020 Dec;763S:100035. doi: 10.1016/j.gene.2020.100035. Epub 2020 May 13. Gene. 2020. PMID: 34493371 Free article.

8

Machine learning and deep learning methods that use omics data for metastasis prediction.

Albaradei S, Thafar M, Alsaedi A, Van Neste C, Gojobori T, Essack M, Gao X. Albaradei S, et al. Comput Struct Biotechnol J. 2021 Sep 4;19:5008-5018. doi: 10.1016/j.csbj.2021.09.001. eCollection 2021. Comput Struct Biotechnol J. 2021. PMID: 34589181 Free PMC article. Review.

9

Predicting Bone Metastasis Using Gene Expression-Based Machine Learning Models.

Albaradei S, Uludag M, Thafar MA, Gojobori T, Essack M, Gao X. Albaradei S, et al. Front Genet. 2021 Nov 10;12:771092. doi: 10.3389/fgene.2021.771092. eCollection 2021. Front Genet. 2021. PMID: 34858485 Free PMC article.

10

Affinity2Vec: drug-target binding affinity prediction through representation learning, graph mining, and machine learning.

Thafar MA, Alshahrani M, Albaradei S, Gojobori T, Essack M, Gao X. Thafar MA, et al. Among authors: albaradei s. Sci Rep. 2022 Mar 19;12(1):4751. doi: 10.1038/s41598-022-08787-9. Sci Rep. 2022. PMID: 35306525 Free PMC article.

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