Nunes da Rocha U - Search Results

1

OrtSuite: from genomes to prediction of microbial interactions within targeted ecosystem processes.

Saraiva JP, Bartholomäus A, Kallies R, Gomes M, Bicalho M, Coelho Kasmanas J, Vogt C, Chatzinotas A, Stadler P, Dias O, Nunes da Rocha U. Saraiva JP, et al. Among authors: nunes da rocha u. Life Sci Alliance. 2021 Sep 27;4(12):e202101167. doi: 10.26508/lsa.202101167. Print 2021 Dec. Life Sci Alliance. 2021. PMID: 34580179 Free PMC article.

2

Evaluation of Sequencing Library Preparation Protocols for Viral Metagenomic Analysis from Pristine Aquifer Groundwaters.

Kallies R, Hölzer M, Brizola Toscan R, Nunes da Rocha U, Anders J, Marz M, Chatzinotas A. Kallies R, et al. Among authors: nunes da rocha u. Viruses. 2019 May 28;11(6):484. doi: 10.3390/v11060484. Viruses. 2019. PMID: 31141902 Free PMC article.

3

Draft Genome Sequence of Brevibacillus sp. Strain LEMMJ03, Isolated from an Antarctic Volcano.

Schultz J, Kallies R, Nunes da Rocha U, Rosado AS. Schultz J, et al. Among authors: nunes da rocha u. Microbiol Resour Announc. 2019 Oct 3;8(40):e00921-19. doi: 10.1128/MRA.00921-19. Microbiol Resour Announc. 2019. PMID: 31582458 Free PMC article.

4

Draft Genome Sequence of Geobacillus sp. Strain LEMMJ02, a Thermophile Isolated from Deception Island, an Active Volcano in Antarctica.

Schultz J, Kallies R, Nunes da Rocha U, Rosado AS. Schultz J, et al. Among authors: nunes da rocha u. Microbiol Resour Announc. 2019 Oct 17;8(42):e00920-19. doi: 10.1128/MRA.00920-19. Microbiol Resour Announc. 2019. PMID: 31624166 Free PMC article.

5

HumanMetagenomeDB: a public repository of curated and standardized metadata for human metagenomes.

Kasmanas JC, Bartholomäus A, Corrêa FB, Tal T, Jehmlich N, Herberth G, von Bergen M, Stadler PF, Carvalho ACPLF, Nunes da Rocha U. Kasmanas JC, et al. Among authors: nunes da rocha u. Nucleic Acids Res. 2021 Jan 8;49(D1):D743-D750. doi: 10.1093/nar/gkaa1031. Nucleic Acids Res. 2021. PMID: 33221926 Free PMC article.

6

Complementary Roles of Wood-Inhabiting Fungi and Bacteria Facilitate Deadwood Decomposition.

Tláskal V, Brabcová V, Větrovský T, Jomura M, López-Mondéjar R, Oliveira Monteiro LM, Saraiva JP, Human ZR, Cajthaml T, Nunes da Rocha U, Baldrian P. Tláskal V, et al. Among authors: nunes da rocha u. mSystems. 2021 Jan 12;6(1):e01078-20. doi: 10.1128/mSystems.01078-20. mSystems. 2021. PMID: 33436515 Free PMC article.

7

Metagenomic insights into the taxonomy, function, and dysbiosis of prokaryotic communities in octocorals.

Keller-Costa T, Lago-Lestón A, Saraiva JP, Toscan R, Silva SG, Gonçalves J, Cox CJ, Kyrpides N, Nunes da Rocha U, Costa R. Keller-Costa T, et al. Among authors: nunes da rocha u. Microbiome. 2021 Mar 25;9(1):72. doi: 10.1186/s40168-021-01031-y. Microbiome. 2021. PMID: 33766108 Free PMC article.

8

Mining Synergistic Microbial Interactions: A Roadmap on How to Integrate Multi-Omics Data.

Saraiva JP, Worrich A, Karakoç C, Kallies R, Chatzinotas A, Centler F, Nunes da Rocha U. Saraiva JP, et al. Among authors: nunes da rocha u. Microorganisms. 2021 Apr 14;9(4):840. doi: 10.3390/microorganisms9040840. Microorganisms. 2021. PMID: 33920040 Free PMC article. Review.

9

Draft Genome Sequence of Fusarium equiseti K3, a Fungal Species Isolated from Hexachlorocyclohexane-Contaminated Soil.

Khan N, Toscan RB, Lunayo A, Wamalwa B, Muge E, Mulaa FJ, Kallies R, Harms H, Wick LY, Nunes da Rocha U. Khan N, et al. Among authors: nunes da rocha u. Microbiol Resour Announc. 2021 Nov 24;10(47):e0088521. doi: 10.1128/MRA.00885-21. Epub 2021 Nov 24. Microbiol Resour Announc. 2021. PMID: 34817210 Free PMC article.

10

PredicTF: prediction of bacterial transcription factors in complex microbial communities using deep learning.

Oliveira Monteiro LM, Saraiva JP, Brizola Toscan R, Stadler PF, Silva-Rocha R, Nunes da Rocha U. Oliveira Monteiro LM, et al. Among authors: nunes da rocha u. Environ Microbiome. 2022 Feb 8;17(1):7. doi: 10.1186/s40793-021-00394-x. Environ Microbiome. 2022. PMID: 35135629 Free PMC article.

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