Holstege FCP - Search Results

1

Improved Gene Fusion Detection in Childhood Cancer Diagnostics Using RNA Sequencing.

Hehir-Kwa JY, Koudijs MJ, Verwiel ETP, Kester LA, van Tuil M, Strengman E, Buijs A, Kranendonk MEG, Hiemcke-Jiwa LS, de Haas V, van de Geer E, de Leng W, van der Lugt J, Lijnzaad P, Holstege FCP, Kemmeren P, Tops BBJ. Hehir-Kwa JY, et al. Among authors: holstege fcp. JCO Precis Oncol. 2022 Jan;6:e2000504. doi: 10.1200/PO.20.00504. JCO Precis Oncol. 2022. PMID: 35085008 Free PMC article.

2

Protein interaction verification and functional annotation by integrated analysis of genome-scale data.

Kemmeren P, van Berkum NL, Vilo J, Bijma T, Donders R, Brazma A, Holstege FC. Kemmeren P, et al. Mol Cell. 2002 May;9(5):1133-43. doi: 10.1016/s1097-2765(02)00531-2. Mol Cell. 2002. PMID: 12049748 Free article.

3

Monitoring global messenger RNA changes in externally controlled microarray experiments.

van de Peppel J, Kemmeren P, van Bakel H, Radonjic M, van Leenen D, Holstege FC. van de Peppel J, et al. EMBO Rep. 2003 Apr;4(4):387-93. doi: 10.1038/sj.embor.embor798. EMBO Rep. 2003. PMID: 12671682 Free PMC article.

4

Integrating functional genomics data.

Kemmeren P, Holstege FC. Kemmeren P, et al. Biochem Soc Trans. 2003 Dec;31(Pt 6):1484-7. doi: 10.1042/bst0311484. Biochem Soc Trans. 2003. PMID: 14641095 Review.

5

Predicting gene function through systematic analysis and quality assessment of high-throughput data.

Kemmeren P, Kockelkorn TT, Bijma T, Donders R, Holstege FC. Kemmeren P, et al. Bioinformatics. 2005 Apr 15;21(8):1644-52. doi: 10.1093/bioinformatics/bti103. Epub 2004 Nov 5. Bioinformatics. 2005. PMID: 15531615

6

An expression profile for diagnosis of lymph node metastases from primary head and neck squamous cell carcinomas.

Roepman P, Wessels LF, Kettelarij N, Kemmeren P, Miles AJ, Lijnzaad P, Tilanus MG, Koole R, Hordijk GJ, van der Vliet PC, Reinders MJ, Slootweg PJ, Holstege FC. Roepman P, et al. Nat Genet. 2005 Feb;37(2):182-6. doi: 10.1038/ng1502. Epub 2005 Jan 9. Nat Genet. 2005. PMID: 15640797

7

Genome-wide analyses reveal RNA polymerase II located upstream of genes poised for rapid response upon S. cerevisiae stationary phase exit.

Radonjic M, Andrau JC, Lijnzaad P, Kemmeren P, Kockelkorn TT, van Leenen D, van Berkum NL, Holstege FC. Radonjic M, et al. Mol Cell. 2005 Apr 15;18(2):171-83. doi: 10.1016/j.molcel.2005.03.010. Mol Cell. 2005. PMID: 15837421 Free article.

8

Gene expression profiling and phenotype analyses of S. cerevisiae in response to changing copper reveals six genes with new roles in copper and iron metabolism.

van Bakel H, Strengman E, Wijmenga C, Holstege FC. van Bakel H, et al. Physiol Genomics. 2005 Aug 11;22(3):356-67. doi: 10.1152/physiolgenomics.00055.2005. Epub 2005 May 10. Physiol Genomics. 2005. PMID: 15886332 Free article.

9

Multiple robust signatures for detecting lymph node metastasis in head and neck cancer.

Roepman P, Kemmeren P, Wessels LF, Slootweg PJ, Holstege FC. Roepman P, et al. Cancer Res. 2006 Feb 15;66(4):2361-6. doi: 10.1158/0008-5472.CAN-05-3960. Cancer Res. 2006. PMID: 16489042

10

Genome-wide location of the coactivator mediator: Binding without activation and transient Cdk8 interaction on DNA.

Andrau JC, van de Pasch L, Lijnzaad P, Bijma T, Koerkamp MG, van de Peppel J, Werner M, Holstege FC. Andrau JC, et al. Mol Cell. 2006 Apr 21;22(2):179-92. doi: 10.1016/j.molcel.2006.03.023. Mol Cell. 2006. PMID: 16630888 Free article.

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