Kemmeren P - Search Results

1

Improved Gene Fusion Detection in Childhood Cancer Diagnostics Using RNA Sequencing.

Hehir-Kwa JY, Koudijs MJ, Verwiel ETP, Kester LA, van Tuil M, Strengman E, Buijs A, Kranendonk MEG, Hiemcke-Jiwa LS, de Haas V, van de Geer E, de Leng W, van der Lugt J, Lijnzaad P, Holstege FCP, Kemmeren P, Tops BBJ. Hehir-Kwa JY, et al. Among authors: kemmeren p. JCO Precis Oncol. 2022 Jan;6:e2000504. doi: 10.1200/PO.20.00504. JCO Precis Oncol. 2022. PMID: 35085008 Free PMC article.

2

Protein interaction verification and functional annotation by integrated analysis of genome-scale data.

Kemmeren P, van Berkum NL, Vilo J, Bijma T, Donders R, Brazma A, Holstege FC. Kemmeren P, et al. Mol Cell. 2002 May;9(5):1133-43. doi: 10.1016/s1097-2765(02)00531-2. Mol Cell. 2002. PMID: 12049748 Free article.

3

Monitoring global messenger RNA changes in externally controlled microarray experiments.

van de Peppel J, Kemmeren P, van Bakel H, Radonjic M, van Leenen D, Holstege FC. van de Peppel J, et al. Among authors: kemmeren p. EMBO Rep. 2003 Apr;4(4):387-93. doi: 10.1038/sj.embor.embor798. EMBO Rep. 2003. PMID: 12671682 Free PMC article.

4

Integrating functional genomics data.

Kemmeren P, Holstege FC. Kemmeren P, et al. Biochem Soc Trans. 2003 Dec;31(Pt 6):1484-7. doi: 10.1042/bst0311484. Biochem Soc Trans. 2003. PMID: 14641095 Review.

5

Nitric oxide donor induces temporal and dose-dependent reduction of gene expression in human endothelial cells.

Braam B, de Roos R, Dijk A, Boer P, Post JA, Kemmeren PP, Holstege FC, Bluysen HA, Koomans HA. Braam B, et al. Among authors: kemmeren pp. Am J Physiol Heart Circ Physiol. 2004 Nov;287(5):H1977-86. doi: 10.1152/ajpheart.00323.2004. Epub 2004 Jul 8. Am J Physiol Heart Circ Physiol. 2004. PMID: 15242832 Free article.

6

Predicting gene function through systematic analysis and quality assessment of high-throughput data.

Kemmeren P, Kockelkorn TT, Bijma T, Donders R, Holstege FC. Kemmeren P, et al. Bioinformatics. 2005 Apr 15;21(8):1644-52. doi: 10.1093/bioinformatics/bti103. Epub 2004 Nov 5. Bioinformatics. 2005. PMID: 15531615

7

An expression profile for diagnosis of lymph node metastases from primary head and neck squamous cell carcinomas.

Roepman P, Wessels LF, Kettelarij N, Kemmeren P, Miles AJ, Lijnzaad P, Tilanus MG, Koole R, Hordijk GJ, van der Vliet PC, Reinders MJ, Slootweg PJ, Holstege FC. Roepman P, et al. Among authors: kemmeren p. Nat Genet. 2005 Feb;37(2):182-6. doi: 10.1038/ng1502. Epub 2005 Jan 9. Nat Genet. 2005. PMID: 15640797

8

Genome-wide analyses reveal RNA polymerase II located upstream of genes poised for rapid response upon S. cerevisiae stationary phase exit.

Radonjic M, Andrau JC, Lijnzaad P, Kemmeren P, Kockelkorn TT, van Leenen D, van Berkum NL, Holstege FC. Radonjic M, et al. Among authors: kemmeren p. Mol Cell. 2005 Apr 15;18(2):171-83. doi: 10.1016/j.molcel.2005.03.010. Mol Cell. 2005. PMID: 15837421 Free article.

9

Multiple robust signatures for detecting lymph node metastasis in head and neck cancer.

Roepman P, Kemmeren P, Wessels LF, Slootweg PJ, Holstege FC. Roepman P, et al. Among authors: kemmeren p. Cancer Res. 2006 Feb 15;66(4):2361-6. doi: 10.1158/0008-5472.CAN-05-3960. Cancer Res. 2006. PMID: 16489042

10

Transcriptome-based identification of pro- and antioxidative gene expression in kidney cortex of nitric oxide-depleted rats.

Wesseling S, Joles JA, van Goor H, Bluyssen HA, Kemmeren P, Holstege FC, Koomans HA, Braam B. Wesseling S, et al. Among authors: kemmeren p. Physiol Genomics. 2007 Jan 17;28(2):158-67. doi: 10.1152/physiolgenomics.00077.2006. Epub 2006 Oct 17. Physiol Genomics. 2007. PMID: 17047089

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