Xue H - Search Results

1

The contribution of uncharted RNA sequences to tumor identity in lung adenocarcinoma.

Wang Y, Xue H, Aglave M, Lainé A, Gallopin M, Gautheret D. Wang Y, et al. Among authors: xue h. NAR Cancer. 2022 Feb 1;4(1):zcac001. doi: 10.1093/narcan/zcac001. eCollection 2022 Mar. NAR Cancer. 2022. PMID: 35118386 Free PMC article.

2

Reference-free transcriptome signatures for prostate cancer prognosis.

Nguyen HTN, Xue H, Firlej V, Ponty Y, Gallopin M, Gautheret D. Nguyen HTN, et al. Among authors: xue h. BMC Cancer. 2021 Apr 12;21(1):394. doi: 10.1186/s12885-021-08021-1. BMC Cancer. 2021. PMID: 33845808 Free PMC article.

3

2-kupl: mapping-free variant detection from DNA-seq data of matched samples.

Wang Y, Xue H, Pourcel C, Du Y, Gautheret D. Wang Y, et al. Among authors: xue h. BMC Bioinformatics. 2021 Jun 5;22(1):304. doi: 10.1186/s12859-021-04185-6. BMC Bioinformatics. 2021. PMID: 34090332 Free PMC article.

4

Kmerator Suite: design of specific k-mer signatures and automatic metadata discovery in large RNA-seq datasets.

Riquier S, Bessiere C, Guibert B, Bouge AL, Boureux A, Ruffle F, Audoux J, Gilbert N, Xue H, Gautheret D, Commes T. Riquier S, et al. Among authors: xue h. NAR Genom Bioinform. 2021 Jun 23;3(3):lqab058. doi: 10.1093/nargab/lqab058. eCollection 2021 Sep. NAR Genom Bioinform. 2021. PMID: 34179780 Free PMC article.

5

KaMRaT: a C++ toolkit for k-mer count matrix dimension reduction.

Xue H, Gallopin M, Marchet C, Nguyen HN, Wang Y, Lainé A, Bessiere C, Gautheret D. Xue H, et al. Bioinformatics. 2024 Mar 4;40(3):btae090. doi: 10.1093/bioinformatics/btae090. Bioinformatics. 2024. PMID: 38444086 Free PMC article.

6

Transipedia.org: k-mer-based exploration of large RNA sequencing datasets and application to cancer data.

Bessière C, Xue H, Guibert B, Boureux A, Rufflé F, Viot J, Chikhi R, Salson M, Marchet C, Commes T, Gautheret D. Bessière C, et al. Among authors: xue h. Genome Biol. 2024 Oct 10;25(1):266. doi: 10.1186/s13059-024-03413-5. Genome Biol. 2024. PMID: 39390592 Free PMC article.

7

Single-cell and spatial transcriptomics analysis of non-small cell lung cancer.

De Zuani M, Xue H, Park JS, Dentro SC, Seferbekova Z, Tessier J, Curras-Alonso S, Hadjipanayis A, Athanasiadis EI, Gerstung M, Bayraktar O, Cvejic A. De Zuani M, et al. Among authors: xue h. Nat Commun. 2024 May 23;15(1):4388. doi: 10.1038/s41467-024-48700-8. Nat Commun. 2024. PMID: 38782901 Free PMC article.

8

Modified nucleotides in Bacillus subtilis tRNA(Trp) hyperexpressed in Escherichia coli.

Xue H, Glasser AL, Desgres J, Grosjean H. Xue H, et al. Nucleic Acids Res. 1993 May 25;21(10):2479-86. doi: 10.1093/nar/21.10.2479. Nucleic Acids Res. 1993. PMID: 8506141 Free PMC article.

9

Design and synthesis of camphor-thiazole derivatives as potent antifungal agents: structure-activity relationship and preliminary mechanistic study.

Dai P, Ma Z, Dang Y, Huang J, Xue H, Sun Y, Gu YC, Xia Q, Zhang W. Dai P, et al. Among authors: xue h. Pest Manag Sci. 2024 Nov 26. doi: 10.1002/ps.8563. Online ahead of print. Pest Manag Sci. 2024. PMID: 39588719

10

Impact of endogenous viral elements on glioma clinical phenotypes by inducing OCT4 in the host.

Li S, He S, Xue H, He Y. Li S, et al. Among authors: xue h. Front Cell Infect Microbiol. 2024 Nov 11;14:1474492. doi: 10.3389/fcimb.2024.1474492. eCollection 2024. Front Cell Infect Microbiol. 2024. PMID: 39588508 Free PMC article.

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