Gribskov M - Search Results

1

Bibliometric review of ATAC-Seq and its application in gene expression.

Luo L, Gribskov M, Wang S. Luo L, et al. Among authors: gribskov m. Brief Bioinform. 2022 May 13;23(3):bbac061. doi: 10.1093/bib/bbac061. Brief Bioinform. 2022. PMID: 35255493 Free PMC article. Review.

2

Analysis of the structure of chemically synthesized HIV-1 protease complexed with a hexapeptide inhibitor. Part I: Crystallographic refinement of 2 A data.

Miller M, Geller M, Gribskov M, Kent SB. Miller M, et al. Among authors: gribskov m. Proteins. 1997 Feb;27(2):184-94. doi: 10.1002/(sici)1097-0134(199702)27:2<184::aid-prot4>3.0.co;2-g. Proteins. 1997. PMID: 9061782

3

A left-handed crossover involved in amidohydrolase catalysis. Crystal structure of Erwinia chrysanthemi L-asparaginase with bound L-aspartate.

Miller M, Rao JK, Wlodawer A, Gribskov MR. Miller M, et al. Among authors: gribskov mr. FEBS Lett. 1993 Aug 16;328(3):275-9. doi: 10.1016/0014-5793(93)80943-o. FEBS Lett. 1993. PMID: 8348975 Free article.

4

CellMiner Companion: an interactive web application to explore CellMiner NCI-60 data.

Wang S, Gribskov M, Hazbun TR, Pascuzzi PE. Wang S, et al. Among authors: gribskov m. Bioinformatics. 2016 Aug 1;32(15):2399-401. doi: 10.1093/bioinformatics/btw162. Epub 2016 Mar 25. Bioinformatics. 2016. PMID: 27153600

5

Comprehensive evaluation of de novo transcriptome assembly programs and their effects on differential gene expression analysis.

Wang S, Gribskov M. Wang S, et al. Among authors: gribskov m. Bioinformatics. 2017 Feb 1;33(3):327-333. doi: 10.1093/bioinformatics/btw625. Bioinformatics. 2017. PMID: 28172640

6

DEIsoM: a hierarchical Bayesian model for identifying differentially expressed isoforms using biological replicates.

Peng H, Yang Y, Zhe S, Wang J, Gribskov M, Qi Y. Peng H, et al. Among authors: gribskov m. Bioinformatics. 2017 Oct 1;33(19):3018-3027. doi: 10.1093/bioinformatics/btx357. Bioinformatics. 2017. PMID: 28595376 Free PMC article.

7

Transcriptome analysis identifies metallothionein as biomarkers to predict recurrence in hepatocellular cacinoma.

Wang S, Gribskov M. Wang S, et al. Among authors: gribskov m. Mol Genet Genomic Med. 2019 Jun;7(6):e693. doi: 10.1002/mgg3.693. Epub 2019 May 6. Mol Genet Genomic Med. 2019. PMID: 31056863 Free PMC article.

8

miRNA-mediated macrophage behaviors responding to matrix stiffness and ox-LDL.

Li J, Wang S, Li Y, Zhang N, Gribskov M, Zhang X, Lin M, Shao D, Zhang C, Dai L, Qin C, Duan X, Li J, Xu F, Yang H. Li J, et al. Among authors: gribskov m. J Cell Physiol. 2020 Sep;235(9):6139-6153. doi: 10.1002/jcp.29543. Epub 2020 Feb 5. J Cell Physiol. 2020. PMID: 32020590

9

Chromatin-enriched RNAs mark active and repressive cis-regulation: An analysis of nuclear RNA-seq.

Sun X, Wang Z, Hall JM, Perez-Cervantes C, Ruthenburg AJ, Moskowitz IP, Gribskov M, Yang XH. Sun X, et al. Among authors: gribskov m. PLoS Comput Biol. 2020 Feb 10;16(2):e1007119. doi: 10.1371/journal.pcbi.1007119. eCollection 2020 Feb. PLoS Comput Biol. 2020. PMID: 32040509 Free PMC article.

10

Shiny-DEG: A Web Application to Analyze and Visualize Differentially Expressed Genes in RNA-seq.

Wang S, Zhang Y, Hu C, Zhang N, Gribskov M, Yang H. Wang S, et al. Among authors: gribskov m. Interdiscip Sci. 2020 Sep;12(3):349-354. doi: 10.1007/s12539-020-00383-7. Epub 2020 Jul 14. Interdiscip Sci. 2020. PMID: 32666343

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