Chen M - Search Results

1

m⁶A RNA modifications are measured at single-base resolution across the mammalian transcriptome.

Hu L, Liu S, Peng Y, Ge R, Su R, Senevirathne C, Harada BT, Dai Q, Wei J, Zhang L, Hao Z, Luo L, Wang H, Wang Y, Luo M, Chen M, Chen J, He C. Hu L, et al. Among authors: chen j, chen m. Nat Biotechnol. 2022 Aug;40(8):1210-1219. doi: 10.1038/s41587-022-01243-z. Epub 2022 Mar 14. Nat Biotechnol. 2022. PMID: 35288668 Free PMC article.

2

m⁶A mRNA Methylation Regulates Human β-Cell Biology in Physiological States and in Type 2 Diabetes.

De Jesus DF, Zhang Z, Kahraman S, Brown NK, Chen M, Hu J, Gupta MK, He C, Kulkarni RN. De Jesus DF, et al. Among authors: chen m. Nat Metab. 2019 Aug;1(8):765-774. doi: 10.1038/s42255-019-0089-9. Epub 2019 Jul 29. Nat Metab. 2019. PMID: 31867565 Free PMC article.

3

RADAR: differential analysis of MeRIP-seq data with a random effect model.

Zhang Z, Zhan Q, Eckert M, Zhu A, Chryplewicz A, De Jesus DF, Ren D, Kulkarni RN, Lengyel E, He C, Chen M. Zhang Z, et al. Among authors: chen m. Genome Biol. 2019 Dec 23;20(1):294. doi: 10.1186/s13059-019-1915-9. Genome Biol. 2019. PMID: 31870409 Free PMC article.

4

REPIC: a database for exploring the N⁶-methyladenosine methylome.

Liu S, Zhu A, He C, Chen M. Liu S, et al. Among authors: chen m. Genome Biol. 2020 Apr 28;21(1):100. doi: 10.1186/s13059-020-02012-4. Genome Biol. 2020. PMID: 32345346 Free PMC article.

5

KAS-seq: genome-wide sequencing of single-stranded DNA by N₃-kethoxal-assisted labeling.

Lyu R, Wu T, Zhu AC, West-Szymanski DC, Weng X, Chen M, He C. Lyu R, et al. Among authors: chen m. Nat Protoc. 2022 Feb;17(2):402-420. doi: 10.1038/s41596-021-00647-6. Epub 2022 Jan 10. Nat Protoc. 2022. PMID: 35013616 Free PMC article. Review.

6

Detection of m⁶A RNA modifications at single-nucleotide resolution using m⁶A-selective allyl chemical labeling and sequencing.

Peng Y, Meng H, Ge R, Liu S, Chen M, He C, Hu L. Peng Y, et al. Among authors: chen m. STAR Protoc. 2022 Dec 16;3(4):101677. doi: 10.1016/j.xpro.2022.101677. Epub 2022 Sep 15. STAR Protoc. 2022. PMID: 36112507 Free PMC article.

7

Author Correction: m⁶A RNA modifications are measured at single-base resolution across the mammalian transcriptome.

Hu L, Liu S, Peng Y, Ge R, Su R, Senevirathne C, Harada BT, Dai Q, Wei J, Zhang L, Hao Z, Luo L, Wang H, Wang Y, Luo M, Chen M, Chen J, He C. Hu L, et al. Among authors: chen j, chen m. Nat Biotechnol. 2023 Jan;41(1):150. doi: 10.1038/s41587-022-01616-4. Nat Biotechnol. 2023. PMID: 36450851 No abstract available.

8

Quantification of extracellular proteins, protein complexes and mRNAs in single cells by proximity sequencing.

Vistain L, Van Phan H, Keisham B, Jordi C, Chen M, Reddy ST, Tay S. Vistain L, et al. Among authors: chen m. Nat Methods. 2022 Dec;19(12):1578-1589. doi: 10.1038/s41592-022-01684-z. Epub 2022 Dec 1. Nat Methods. 2022. PMID: 36456784 Free PMC article.

9

Transcriptome-wide profiling and quantification of N⁶-methyladenosine by enzyme-assisted adenosine deamination.

Xiao YL, Liu S, Ge R, Wu Y, He C, Chen M, Tang W. Xiao YL, et al. Among authors: chen m. Nat Biotechnol. 2023 Jul;41(7):993-1003. doi: 10.1038/s41587-022-01587-6. Epub 2023 Jan 2. Nat Biotechnol. 2023. PMID: 36593412 Free PMC article.

10

Exon architecture controls mRNA m⁶A suppression and gene expression.

He PC, Wei J, Dou X, Harada BT, Zhang Z, Ge R, Liu C, Zhang LS, Yu X, Wang S, Lyu R, Zou Z, Chen M, He C. He PC, et al. Among authors: chen m. Science. 2023 Feb 17;379(6633):677-682. doi: 10.1126/science.abj9090. Epub 2023 Jan 27. Science. 2023. PMID: 36705538 Free PMC article.

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