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Page 1
Single nucleus multi-omics identifies human cortical cell regulatory genome diversity.
Luo C, Liu H, Xie F, Armand EJ, Siletti K, Bakken TE, Fang R, Doyle WI, Stuart T, Hodge RD, Hu L, Wang BA, Zhang Z, Preissl S, Lee DS, Zhou J, Niu SY, Castanon R, Bartlett A, Rivkin A, Wang X, Lucero J, Nery JR, Davis DA, Mash DC, Satija R, Dixon JR, Linnarsson S, Lein E, Behrens MM, Ren B, Mukamel EA, Ecker JR. Luo C, et al. Among authors: ecker jr. Cell Genom. 2022 Mar 9;2(3):100107. doi: 10.1016/j.xgen.2022.100107. Cell Genom. 2022. PMID: 35419551 Free PMC article.
Applications of DNA tiling arrays for whole-genome analysis.
Mockler TC, Chan S, Sundaresan A, Chen H, Jacobsen SE, Ecker JR. Mockler TC, et al. Among authors: ecker jr. Genomics. 2005 Jan;85(1):1-15. doi: 10.1016/j.ygeno.2004.10.005. Genomics. 2005. PMID: 15607417 Review.
Human DNA methylomes at base resolution show widespread epigenomic differences.
Lister R, Pelizzola M, Dowen RH, Hawkins RD, Hon G, Tonti-Filippini J, Nery JR, Lee L, Ye Z, Ngo QM, Edsall L, Antosiewicz-Bourget J, Stewart R, Ruotti V, Millar AH, Thomson JA, Ren B, Ecker JR. Lister R, et al. Among authors: ecker jr. Nature. 2009 Nov 19;462(7271):315-22. doi: 10.1038/nature08514. Epub 2009 Oct 14. Nature. 2009. PMID: 19829295 Free PMC article.
Distinct epigenomic landscapes of pluripotent and lineage-committed human cells.
Hawkins RD, Hon GC, Lee LK, Ngo Q, Lister R, Pelizzola M, Edsall LE, Kuan S, Luu Y, Klugman S, Antosiewicz-Bourget J, Ye Z, Espinoza C, Agarwahl S, Shen L, Ruotti V, Wang W, Stewart R, Thomson JA, Ecker JR, Ren B. Hawkins RD, et al. Among authors: ecker jr. Cell Stem Cell. 2010 May 7;6(5):479-91. doi: 10.1016/j.stem.2010.03.018. Cell Stem Cell. 2010. PMID: 20452322 Free PMC article.
Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells.
Lister R, Pelizzola M, Kida YS, Hawkins RD, Nery JR, Hon G, Antosiewicz-Bourget J, O'Malley R, Castanon R, Klugman S, Downes M, Yu R, Stewart R, Ren B, Thomson JA, Evans RM, Ecker JR. Lister R, et al. Among authors: ecker jr. Nature. 2011 Mar 3;471(7336):68-73. doi: 10.1038/nature09798. Epub 2011 Feb 2. Nature. 2011. PMID: 21289626 Free PMC article.
Widespread dynamic DNA methylation in response to biotic stress.
Dowen RH, Pelizzola M, Schmitz RJ, Lister R, Dowen JM, Nery JR, Dixon JE, Ecker JR. Dowen RH, et al. Among authors: ecker jr. Proc Natl Acad Sci U S A. 2012 Aug 7;109(32):E2183-91. doi: 10.1073/pnas.1209329109. Epub 2012 Jun 25. Proc Natl Acad Sci U S A. 2012. PMID: 22733782 Free PMC article.
Patterns of population epigenomic diversity.
Schmitz RJ, Schultz MD, Urich MA, Nery JR, Pelizzola M, Libiger O, Alix A, McCosh RB, Chen H, Schork NJ, Ecker JR. Schmitz RJ, et al. Among authors: ecker jr. Nature. 2013 Mar 14;495(7440):193-8. doi: 10.1038/nature11968. Epub 2013 Mar 6. Nature. 2013. PMID: 23467092 Free PMC article.
Epigenomic analysis of multilineage differentiation of human embryonic stem cells.
Xie W, Schultz MD, Lister R, Hou Z, Rajagopal N, Ray P, Whitaker JW, Tian S, Hawkins RD, Leung D, Yang H, Wang T, Lee AY, Swanson SA, Zhang J, Zhu Y, Kim A, Nery JR, Urich MA, Kuan S, Yen CA, Klugman S, Yu P, Suknuntha K, Propson NE, Chen H, Edsall LE, Wagner U, Li Y, Ye Z, Kulkarni A, Xuan Z, Chung WY, Chi NC, Antosiewicz-Bourget JE, Slukvin I, Stewart R, Zhang MQ, Wang W, Thomson JA, Ecker JR, Ren B. Xie W, et al. Among authors: ecker jr. Cell. 2013 May 23;153(5):1134-48. doi: 10.1016/j.cell.2013.04.022. Epub 2013 May 9. Cell. 2013. PMID: 23664764 Free PMC article.
340 results