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High-resolution 3D spatiotemporal transcriptomic maps of developing Drosophila embryos and larvae.
Wang M, Hu Q, Lv T, Wang Y, Lan Q, Xiang R, Tu Z, Wei Y, Han K, Shi C, Guo J, Liu C, Yang T, Du W, An Y, Cheng M, Xu J, Lu H, Li W, Zhang S, Chen A, Chen W, Li Y, Wang X, Xu X, Hu Y, Liu L. Wang M, et al. Among authors: chen a, chen w. Dev Cell. 2022 May 23;57(10):1271-1283.e4. doi: 10.1016/j.devcel.2022.04.006. Epub 2022 May 4. Dev Cell. 2022. PMID: 35512700 Free article.
The first chromosome-level genome for a marine mammal as a resource to study ecology and evolution.
Fan G, Zhang Y, Liu X, Wang J, Sun Z, Sun S, Zhang H, Chen J, Lv M, Han K, Tan X, Hu J, Guan R, Fu Y, Liu S, Chen X, Xu Q, Qin Y, Liu L, Bai J, Wang O, Tang J, Lu H, Shang Z, Wang B, Hu G, Zhao X, Zou Y, Chen A, Gong M, Zhang W, Lee SM, Li S, Liu J, Li Z, Lu Y, Sabir JSM, Sabir MJ, Khan M, Hajrah NH, Yin Y, Kristiansen K, Yang H, Wang J, Xu X, Liu X. Fan G, et al. Among authors: chen j, chen a, chen x. Mol Ecol Resour. 2019 Jul;19(4):944-956. doi: 10.1111/1755-0998.13003. Epub 2019 May 9. Mol Ecol Resour. 2019. PMID: 30735609
An ATAC-seq atlas of chromatin accessibility in mouse tissues.
Liu C, Wang M, Wei X, Wu L, Xu J, Dai X, Xia J, Cheng M, Yuan Y, Zhang P, Li J, Feng T, Chen A, Zhang W, Chen F, Shang Z, Zhang X, Peters BA, Liu L. Liu C, et al. Among authors: chen a, chen f. Sci Data. 2019 May 20;6(1):65. doi: 10.1038/s41597-019-0071-0. Sci Data. 2019. PMID: 31110271 Free PMC article.
Clinical challenges of tissue preparation for spatial transcriptome.
Liu X, Jiang Y, Song D, Zhang L, Xu G, Hou R, Zhang Y, Chen J, Cheng Y, Liu L, Xu X, Chen G, Wu D, Chen T, Chen A, Wang X. Liu X, et al. Among authors: chen j, chen a, chen t, chen g. Clin Transl Med. 2022 Jan;12(1):e669. doi: 10.1002/ctm2.669. Clin Transl Med. 2022. PMID: 35083877 Free PMC article.
Spatial Transcriptome Uncovers the Mouse Lung Architectures and Functions.
Jiang Y, Hao S, Chen X, Cheng M, Xu J, Li C, Zheng H, Volpe G, Chen A, Liao S, Liu C, Liu L, Xu X. Jiang Y, et al. Among authors: chen a, chen x. Front Genet. 2022 Mar 9;13:858808. doi: 10.3389/fgene.2022.858808. eCollection 2022. Front Genet. 2022. PMID: 35391793 Free PMC article. No abstract available.
Spatiotemporal mapping of gene expression landscapes and developmental trajectories during zebrafish embryogenesis.
Liu C, Li R, Li Y, Lin X, Zhao K, Liu Q, Wang S, Yang X, Shi X, Ma Y, Pei C, Wang H, Bao W, Hui J, Yang T, Xu Z, Lai T, Berberoglu MA, Sahu SK, Esteban MA, Ma K, Fan G, Li Y, Liu S, Chen A, Xu X, Dong Z, Liu L. Liu C, et al. Among authors: chen a. Dev Cell. 2022 May 23;57(10):1284-1298.e5. doi: 10.1016/j.devcel.2022.04.009. Epub 2022 May 4. Dev Cell. 2022. PMID: 35512701 Free article.
The single-cell stereo-seq reveals region-specific cell subtypes and transcriptome profiling in Arabidopsis leaves.
Xia K, Sun HX, Li J, Li J, Zhao Y, Chen L, Qin C, Chen R, Chen Z, Liu G, Yin R, Mu B, Wang X, Xu M, Li X, Yuan P, Qiao Y, Hao S, Wang J, Xie Q, Xu J, Liu S, Li Y, Chen A, Liu L, Yin Y, Yang H, Wang J, Gu Y, Xu X. Xia K, et al. Among authors: chen z, chen l, chen a, chen r. Dev Cell. 2022 May 23;57(10):1299-1310.e4. doi: 10.1016/j.devcel.2022.04.011. Epub 2022 May 4. Dev Cell. 2022. PMID: 35512702 Free article.
Spatiotemporal transcriptomic atlas of mouse organogenesis using DNA nanoball-patterned arrays.
Chen A, Liao S, Cheng M, Ma K, Wu L, Lai Y, Qiu X, Yang J, Xu J, Hao S, Wang X, Lu H, Chen X, Liu X, Huang X, Li Z, Hong Y, Jiang Y, Peng J, Liu S, Shen M, Liu C, Li Q, Yuan Y, Wei X, Zheng H, Feng W, Wang Z, Liu Y, Wang Z, Yang Y, Xiang H, Han L, Qin B, Guo P, Lai G, Muñoz-Cánoves P, Maxwell PH, Thiery JP, Wu QF, Zhao F, Chen B, Li M, Dai X, Wang S, Kuang H, Hui J, Wang L, Fei JF, Wang O, Wei X, Lu H, Wang B, Liu S, Gu Y, Ni M, Zhang W, Mu F, Yin Y, Yang H, Lisby M, Cornall RJ, Mulder J, Uhlén M, Esteban MA, Li Y, Liu L, Xu X, Wang J. Chen A, et al. Among authors: chen b, chen x. Cell. 2022 May 12;185(10):1777-1792.e21. doi: 10.1016/j.cell.2022.04.003. Epub 2022 May 4. Cell. 2022. PMID: 35512705 Free article.
A Cellular Resolution Spatial Transcriptomic Landscape of the Medial Structures in Postnatal Mouse Brain.
Cheng M, Wu L, Han L, Huang X, Lai Y, Xu J, Wang S, Li M, Zheng H, Feng W, Huang Z, Jiang Y, Hao S, Li Z, Chen X, Peng J, Guo P, Zhang X, Lai G, Deng Q, Yuan Y, Yang F, Wei X, Liao S, Chen A, Volpe G, Esteban MA, Hou Y, Liu C, Liu L. Cheng M, et al. Among authors: chen a, chen x. Front Cell Dev Biol. 2022 May 17;10:878346. doi: 10.3389/fcell.2022.878346. eCollection 2022. Front Cell Dev Biol. 2022. PMID: 35656552 Free PMC article. No abstract available.
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