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Microscopy-BIDS: An Extension to the Brain Imaging Data Structure for Microscopy Data.
Bourget MH, Kamentsky L, Ghosh SS, Mazzamuto G, Lazari A, Markiewicz CJ, Oostenveld R, Niso G, Halchenko YO, Lipp I, Takerkart S, Toussaint PJ, Khan AR, Nilsonne G, Castelli FM; BIDS Maintainers; Cohen-Adad J. Bourget MH, et al. Among authors: kamentsky l. Front Neurosci. 2022 Apr 19;16:871228. doi: 10.3389/fnins.2022.871228. eCollection 2022. Front Neurosci. 2022. PMID: 35516811 Free PMC article.
Integrated platform for multiscale molecular imaging and phenotyping of the human brain.
Park J, Wang J, Guan W, Gjesteby LA, Pollack D, Kamentsky L, Evans NB, Stirman J, Gu X, Zhao C, Marx S, Kim ME, Choi SW, Snyder M, Chavez D, Su-Arcaro C, Tian Y, Park CS, Zhang Q, Yun DH, Moukheiber M, Feng G, Yang XW, Keene CD, Hof PR, Ghosh SS, Frosch MP, Brattain LJ, Chung K. Park J, et al. Among authors: kamentsky l. Science. 2024 Jun 14;384(6701):eadh9979. doi: 10.1126/science.adh9979. Epub 2024 Jun 14. Science. 2024. PMID: 38870291
Crowdsourcing the creation of image segmentation algorithms for connectomics.
Arganda-Carreras I, Turaga SC, Berger DR, Cireşan D, Giusti A, Gambardella LM, Schmidhuber J, Laptev D, Dwivedi S, Buhmann JM, Liu T, Seyedhosseini M, Tasdizen T, Kamentsky L, Burget R, Uher V, Tan X, Sun C, Pham TD, Bas E, Uzunbas MG, Cardona A, Schindelin J, Seung HS. Arganda-Carreras I, et al. Among authors: kamentsky l. Front Neuroanat. 2015 Nov 5;9:142. doi: 10.3389/fnana.2015.00142. eCollection 2015. Front Neuroanat. 2015. PMID: 26594156 Free PMC article.
Two Stream Active Query Suggestion for Active Learning in Connectomics.
Lin Z, Wei D, Jang WD, Zhou S, Chen X, Wang X, Schalek R, Berger D, Matejek B, Kamentsky L, Peleg A, Haehn D, Jones T, Parag T, Lichtman J, Pfister H. Lin Z, et al. Among authors: kamentsky l. Comput Vis ECCV. 2020 Aug;12363:103-120. doi: 10.1007/978-3-030-58523-5_7. Epub 2020 Dec 4. Comput Vis ECCV. 2020. PMID: 33345257 Free PMC article.
An image analysis toolbox for high-throughput C. elegans assays.
Wählby C, Kamentsky L, Liu ZH, Riklin-Raviv T, Conery AL, O'Rourke EJ, Sokolnicki KL, Visvikis O, Ljosa V, Irazoqui JE, Golland P, Ruvkun G, Ausubel FM, Carpenter AE. Wählby C, et al. Among authors: kamentsky l. Nat Methods. 2012 Apr 22;9(7):714-6. doi: 10.1038/nmeth.1984. Nat Methods. 2012. PMID: 22522656 Free PMC article.
A call for bioimaging software usability.
Carpenter AE, Kamentsky L, Eliceiri KW. Carpenter AE, et al. Among authors: kamentsky l. Nat Methods. 2012 Jun 28;9(7):666-70. doi: 10.1038/nmeth.2073. Nat Methods. 2012. PMID: 22743771 Free PMC article.
QSAR-Driven Discovery of Novel Chemical Scaffolds Active against Schistosoma mansoni.
Melo-Filho CC, Dantas RF, Braga RC, Neves BJ, Senger MR, Valente WC, Rezende-Neto JM, Chaves WT, Muratov EN, Paveley RA, Furnham N, Kamentsky L, Carpenter AE, Silva-Junior FP, Andrade CH. Melo-Filho CC, et al. Among authors: kamentsky l. J Chem Inf Model. 2016 Jul 25;56(7):1357-72. doi: 10.1021/acs.jcim.6b00055. Epub 2016 Jun 16. J Chem Inf Model. 2016. PMID: 27253773 Free PMC article.
46 results