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Natural Language Processing for EHR-Based Computational Phenotyping.
Zeng Z, Deng Y, Li X, Naumann T, Luo Y. Zeng Z, et al. Among authors: deng y. IEEE/ACM Trans Comput Biol Bioinform. 2019 Jan-Feb;16(1):139-153. doi: 10.1109/TCBB.2018.2849968. Epub 2018 Jun 25. IEEE/ACM Trans Comput Biol Bioinform. 2019. PMID: 29994486 Free PMC article. Review.
Evaluating the Portability of an NLP System for Processing Echocardiograms: A Retrospective, Multi-site Observational Study.
Adekkanattu P, Jiang G, Luo Y, Kingsbury PR, Xu Z, Rasmussen LV, Pacheco JA, Kiefer RC, Stone DJ, Brandt PS, Yao L, Zhong Y, Deng Y, Wang F, Ancker JS, Campion TR, Pathak J. Adekkanattu P, et al. Among authors: deng y. AMIA Annu Symp Proc. 2020 Mar 4;2019:190-199. eCollection 2019. AMIA Annu Symp Proc. 2020. PMID: 32308812 Free PMC article.
Evaluation of the portability of computable phenotypes with natural language processing in the eMERGE network.
Pacheco JA, Rasmussen LV, Wiley K Jr, Person TN, Cronkite DJ, Sohn S, Murphy S, Gundelach JH, Gainer V, Castro VM, Liu C, Mentch F, Lingren T, Sundaresan AS, Eickelberg G, Willis V, Furmanchuk A, Patel R, Carrell DS, Deng Y, Walton N, Satterfield BA, Kullo IJ, Dikilitas O, Smith JC, Peterson JF, Shang N, Kiryluk K, Ni Y, Li Y, Nadkarni GN, Rosenthal EA, Walunas TL, Williams MS, Karlson EW, Linder JE, Luo Y, Weng C, Wei W. Pacheco JA, et al. Among authors: deng y. Sci Rep. 2023 Feb 3;13(1):1971. doi: 10.1038/s41598-023-27481-y. Sci Rep. 2023. PMID: 36737471 Free PMC article.
Incorporating longitudinal history of risk factors into atherosclerotic cardiovascular disease risk prediction using deep learning.
Yu J, Yang X, Deng Y, Krefman AE, Pool LR, Zhao L, Mi X, Ning H, Wilkins J, Lloyd-Jones DM, Petito LC, Allen NB. Yu J, et al. Among authors: deng y. Res Sq [Preprint]. 2023 Oct 13:rs.3.rs-3405388. doi: 10.21203/rs.3.rs-3405388/v1. Res Sq. 2023. Update in: Sci Rep. 2024 Jan 31;14(1):2554. doi: 10.1038/s41598-024-51685-5 PMID: 37886463 Free PMC article. Updated. Preprint.
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