Siepel A - Search Results

1

Extreme purifying selection against point mutations in the human genome.

Dukler N, Mughal MR, Ramani R, Huang YF, Siepel A. Dukler N, et al. Among authors: siepel a. Nat Commun. 2022 Jul 25;13(1):4312. doi: 10.1038/s41467-022-31872-6. Nat Commun. 2022. PMID: 35879308 Free PMC article.

2

Single-cell transcription mapping of murine and human mammary organoids responses to female hormones.

Ortiz JR, Lewis SM, Ciccone MF, Chatterjee D, Henry S, Siepel A, Dos Santos CO. Ortiz JR, et al. Among authors: siepel a. bioRxiv [Preprint]. 2023 Sep 29:2023.09.28.559971. doi: 10.1101/2023.09.28.559971. bioRxiv. 2023. Update in: J Mammary Gland Biol Neoplasia. 2024 Jan 30;29(1):3. doi: 10.1007/s10911-023-09553-x PMID: 37808747 Free PMC article. Updated. Preprint.

3

Bayesian inference of ancient human demography from individual genome sequences.

Gronau I, Hubisz MJ, Gulko B, Danko CG, Siepel A. Gronau I, et al. Among authors: siepel a. Nat Genet. 2011 Sep 18;43(10):1031-4. doi: 10.1038/ng.937. Nat Genet. 2011. PMID: 21926973 Free PMC article.

4

Genome-wide inference of natural selection on human transcription factor binding sites.

Arbiza L, Gronau I, Aksoy BA, Hubisz MJ, Gulko B, Keinan A, Siepel A. Arbiza L, et al. Among authors: siepel a. Nat Genet. 2013 Jul;45(7):723-9. doi: 10.1038/ng.2658. Epub 2013 Jun 9. Nat Genet. 2013. PMID: 23749186 Free PMC article.

5

A method for calculating probabilities of fitness consequences for point mutations across the human genome.

Gulko B, Hubisz MJ, Gronau I, Siepel A. Gulko B, et al. Among authors: siepel a. Nat Genet. 2015 Mar;47(3):276-83. doi: 10.1038/ng.3196. Epub 2015 Jan 19. Nat Genet. 2015. PMID: 25599402 Free PMC article.

6

Ancient gene flow from early modern humans into Eastern Neanderthals.

Kuhlwilm M, Gronau I, Hubisz MJ, de Filippo C, Prado-Martinez J, Kircher M, Fu Q, Burbano HA, Lalueza-Fox C, de la Rasilla M, Rosas A, Rudan P, Brajkovic D, Kucan Ž, Gušic I, Marques-Bonet T, Andrés AM, Viola B, Pääbo S, Meyer M, Siepel A, Castellano S. Kuhlwilm M, et al. Among authors: siepel a. Nature. 2016 Feb 25;530(7591):429-33. doi: 10.1038/nature16544. Epub 2016 Feb 17. Nature. 2016. PMID: 26886800 Free PMC article.

7

Is a super-enhancer greater than the sum of its parts?

Dukler N, Gulko B, Huang YF, Siepel A. Dukler N, et al. Among authors: siepel a. Nat Genet. 2016 Dec 28;49(1):2-3. doi: 10.1038/ng.3759. Nat Genet. 2016. PMID: 28029159 Free PMC article. No abstract available.

8

Fast, scalable prediction of deleterious noncoding variants from functional and population genomic data.

Huang YF, Gulko B, Siepel A. Huang YF, et al. Among authors: siepel a. Nat Genet. 2017 Apr;49(4):618-624. doi: 10.1038/ng.3810. Epub 2017 Mar 13. Nat Genet. 2017. PMID: 28288115 Free PMC article.

9

Nascent RNA sequencing reveals a dynamic global transcriptional response at genes and enhancers to the natural medicinal compound celastrol.

Dukler N, Booth GT, Huang YF, Tippens N, Waters CT, Danko CG, Lis JT, Siepel A. Dukler N, et al. Among authors: siepel a. Genome Res. 2017 Nov;27(11):1816-1829. doi: 10.1101/gr.222935.117. Epub 2017 Oct 12. Genome Res. 2017. PMID: 29025894 Free PMC article.

10

Scikit-ribo Enables Accurate Estimation and Robust Modeling of Translation Dynamics at Codon Resolution.

Fang H, Huang YF, Radhakrishnan A, Siepel A, Lyon GJ, Schatz MC. Fang H, et al. Among authors: siepel a. Cell Syst. 2018 Feb 28;6(2):180-191.e4. doi: 10.1016/j.cels.2017.12.007. Epub 2018 Jan 17. Cell Syst. 2018. PMID: 29361467 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Article Language

Species

Sex

Age

Other

116 results

Search Page

Filters