Johnston AD - Search Results

1

Genomic insights into host and parasite interactions during intracellular infection by Toxoplasma gondii.

Ulahannan N, Cutler R, Doña-Termine R, Simões-Pires CA, Wijetunga NA, Croken MM, Johnston AD, Kong Y, Maqbool SB, Suzuki M, Greally JM. Ulahannan N, et al. Among authors: johnston ad. PLoS One. 2022 Sep 30;17(9):e0275226. doi: 10.1371/journal.pone.0275226. eCollection 2022. PLoS One. 2022. PMID: 36178892 Free PMC article.

2

SMITE: an R/Bioconductor package that identifies network modules by integrating genomic and epigenomic information.

Wijetunga NA, Johnston AD, Maekawa R, Delahaye F, Ulahannan N, Kim K, Greally JM. Wijetunga NA, et al. Among authors: johnston ad. BMC Bioinformatics. 2017 Jan 18;18(1):41. doi: 10.1186/s12859-017-1477-3. BMC Bioinformatics. 2017. PMID: 28100166 Free PMC article.

3

Functional genetic variants can mediate their regulatory effects through alteration of transcription factor binding.

Johnston AD, Simões-Pires CA, Thompson TV, Suzuki M, Greally JM. Johnston AD, et al. Nat Commun. 2019 Aug 2;10(1):3472. doi: 10.1038/s41467-019-11412-5. Nat Commun. 2019. PMID: 31375681 Free PMC article.

4

High-efficiency genomic editing in Epstein-Barr virus-transformed lymphoblastoid B cells using a single-stranded donor oligonucleotide strategy.

Johnston AD, Simões-Pires CA, Suzuki M, Greally JM. Johnston AD, et al. Commun Biol. 2019 Aug 14;2:312. doi: 10.1038/s42003-019-0559-3. eCollection 2019. Commun Biol. 2019. PMID: 31428700 Free PMC article.

5

A Cellular Stress Response Induced by the CRISPR-dCas9 Activation System Is Not Heritable Through Cell Divisions.

Johnston AD, Abdulrazak A, Sato H, Maqbool SB, Suzuki M, Greally JM, Simões-Pires CA. Johnston AD, et al. CRISPR J. 2020 Jun;3(3):188-197. doi: 10.1089/crispr.2019.0077. CRISPR J. 2020. PMID: 33560917

6

Functional Genomics of the Pediatric Obese Asthma Phenotype Reveal Enrichment of Rho-GTPase Pathways.

Rastogi D, Johnston AD, Nico J, Loh LN, Jorge Y, Suzuki M, Macian F, Greally JM. Rastogi D, et al. Among authors: johnston ad. Am J Respir Crit Care Med. 2020 Jul 15;202(2):259-274. doi: 10.1164/rccm.201906-1199OC. Am J Respir Crit Care Med. 2020. PMID: 32255672 Free PMC article.

7

CDC42-related genes are upregulated in helper T cells from obese asthmatic children.

Rastogi D, Nico J, Johnston AD, Tobias TAM, Jorge Y, Macian F, Greally JM. Rastogi D, et al. Among authors: johnston ad. J Allergy Clin Immunol. 2018 Feb;141(2):539-548.e7. doi: 10.1016/j.jaci.2017.04.016. Epub 2017 May 4. J Allergy Clin Immunol. 2018. PMID: 28479334 Free PMC article. Clinical Trial.

8

Whole-genome bisulfite sequencing with improved accuracy and cost.

Suzuki M, Liao W, Wos F, Johnston AD, DeGrazia J, Ishii J, Bloom T, Zody MC, Germer S, Greally JM. Suzuki M, et al. Among authors: johnston ad. Genome Res. 2018 Sep;28(9):1364-1371. doi: 10.1101/gr.232587.117. Epub 2018 Aug 9. Genome Res. 2018. PMID: 30093547 Free PMC article.

9

SARS-CoV-2 PCR cycle threshold at hospital admission associated with patient mortality.

Choudhuri J, Carter J, Nelson R, Skalina K, Osterbur-Badhey M, Johnston A, Goldstein D, Paroder M, Szymanski J. Choudhuri J, et al. PLoS One. 2020 Dec 31;15(12):e0244777. doi: 10.1371/journal.pone.0244777. eCollection 2020. PLoS One. 2020. PMID: 33382805 Free PMC article.

10

Hepcidin levels can distinguish anemia of chronic disease from iron deficiency anemia in a cross-sectional study of patients with hidradenitis suppurativa.

Ghias MH, Johnston AD, Babbush KM, Kutner AJ, Hosgood HD, Lowes MA, Gil MR, Cohen SR. Ghias MH, et al. Among authors: johnston ad. J Am Acad Dermatol. 2022 Apr;86(4):954-956. doi: 10.1016/j.jaad.2021.03.090. Epub 2021 Apr 2. J Am Acad Dermatol. 2022. PMID: 33812958 No abstract available.

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