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Deep learning of cross-species single-cell landscapes identifies conserved regulatory programs underlying cell types.
Li J, Wang J, Zhang P, Wang R, Mei Y, Sun Z, Fei L, Jiang M, Ma L, E W, Chen H, Wang X, Fu Y, Wu H, Liu D, Wang X, Li J, Guo Q, Liao Y, Yu C, Jia D, Wu J, He S, Liu H, Ma J, Lei K, Chen J, Han X, Guo G. Li J, et al. Among authors: zhang p. Nat Genet. 2022 Nov;54(11):1711-1720. doi: 10.1038/s41588-022-01197-7. Epub 2022 Oct 13. Nat Genet. 2022. PMID: 36229673
Tracing cell-type evolution by cross-species comparison of cell atlases.
Wang J, Sun H, Jiang M, Li J, Zhang P, Chen H, Mei Y, Fei L, Lai S, Han X, Song X, Xu S, Chen M, Ouyang H, Zhang D, Yuan GC, Guo G. Wang J, et al. Among authors: zhang p, zhang d. Cell Rep. 2021 Mar 2;34(9):108803. doi: 10.1016/j.celrep.2021.108803. Cell Rep. 2021. PMID: 33657376 Free article.
Construction of the axolotl cell landscape using combinatorial hybridization sequencing at single-cell resolution.
Ye F, Zhang G, E W, Chen H, Yu C, Yang L, Fu Y, Li J, Fu S, Sun Z, Fei L, Guo Q, Wang J, Xiao Y, Wang X, Zhang P, Ma L, Ge D, Xu S, Caballero-Pérez J, Cruz-Ramírez A, Zhou Y, Chen M, Fei JF, Han X, Guo G. Ye F, et al. Among authors: zhang p, zhang g. Nat Commun. 2022 Jul 22;13(1):4228. doi: 10.1038/s41467-022-31879-z. Nat Commun. 2022. PMID: 35869072 Free PMC article.
Cell landscape of larval and adult Xenopus laevis at single-cell resolution.
Liao Y, Ma L, Guo Q, E W, Fang X, Yang L, Ruan F, Wang J, Zhang P, Sun Z, Chen H, Lin Z, Wang X, Wang X, Sun H, Fang X, Zhou Y, Chen M, Shen W, Guo G, Han X. Liao Y, et al. Among authors: zhang p. Nat Commun. 2022 Jul 25;13(1):4306. doi: 10.1038/s41467-022-31949-2. Nat Commun. 2022. PMID: 35879314 Free PMC article.
Construction of a cross-species cell landscape at single-cell level.
Wang R, Zhang P, Wang J, Ma L, E W, Suo S, Jiang M, Li J, Chen H, Sun H, Fei L, Zhou Z, Zhou Y, Chen Y, Zhang W, Wang X, Mei Y, Sun Z, Yu C, Shao J, Fu Y, Xiao Y, Ye F, Fang X, Wu H, Guo Q, Fang X, Li X, Gao X, Wang D, Xu PF, Zeng R, Xu G, Zhu L, Wang L, Qu J, Zhang D, Ouyang H, Huang H, Chen M, Ng SC, Liu GH, Yuan GC, Guo G, Han X. Wang R, et al. Among authors: zhang p, zhang w, zhang d. Nucleic Acids Res. 2023 Jan 25;51(2):501-516. doi: 10.1093/nar/gkac633. Nucleic Acids Res. 2023. PMID: 35929025 Free PMC article.
Pan-Cancer Single-Nucleus Total RNA Sequencing Using snHH-Seq.
Chen H, Fang X, Shao J, Zhang Q, Xu L, Chen J, Mei Y, Jiang M, Wang Y, Li Z, Chen Z, Chen Y, Yu C, Ma L, Zhang P, Zhang T, Liao Y, Lv Y, Wang X, Yang L, Fu Y, Chen D, Jiang L, Yan F, Lu W, Chen G, Shen H, Wang J, Wang C, Liang T, Han X, Wang Y, Guo G. Chen H, et al. Among authors: zhang p, zhang q, zhang t. Adv Sci (Weinh). 2024 Feb;11(5):e2304755. doi: 10.1002/advs.202304755. Epub 2023 Nov 27. Adv Sci (Weinh). 2024. PMID: 38010945 Free PMC article.
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