Rouse WB - Search Results

1

Thermodynamic and structural characterization of an EBV infected B-cell lymphoma transcriptome.

O'Leary CA, Van Tompkins S, Rouse WB, Nam G, Moss WN. O'Leary CA, et al. Among authors: rouse wb. NAR Genom Bioinform. 2022 Oct 21;4(4):lqac082. doi: 10.1093/nargab/lqac082. eCollection 2022 Dec. NAR Genom Bioinform. 2022. PMID: 36285286 Free PMC article.

2

Prediction and analysis of functional RNA structures within the integrative genomics viewer.

Rouse WB, Andrews RJ, Booher NJ, Wang J, Woodman ME, Dow ER, Jessop TC, Moss WN. Rouse WB, et al. NAR Genom Bioinform. 2022 Jan 14;4(1):lqab127. doi: 10.1093/nargab/lqab127. eCollection 2022 Mar. NAR Genom Bioinform. 2022. PMID: 35047817 Free PMC article.

3

Analyses of human cancer driver genes uncovers evolutionarily conserved RNA structural elements involved in posttranscriptional control.

Tompkins VS, Rouse WB, O'Leary CA, Andrews RJ, Moss WN. Tompkins VS, et al. Among authors: rouse wb. PLoS One. 2022 Feb 25;17(2):e0264025. doi: 10.1371/journal.pone.0264025. eCollection 2022. PLoS One. 2022. PMID: 35213597 Free PMC article.

4

Transcriptome-Wide Mapping of Small-Molecule RNA-Binding Sites in Cells Informs an Isoform-Specific Degrader of QSOX1 mRNA.

Tong Y, Gibaut QMR, Rouse W, Childs-Disney JL, Suresh BM, Abegg D, Choudhary S, Akahori Y, Adibekian A, Moss WN, Disney MD. Tong Y, et al. J Am Chem Soc. 2022 Jul 6;144(26):11620-11625. doi: 10.1021/jacs.2c01929. Epub 2022 Jun 23. J Am Chem Soc. 2022. PMID: 35737519 Free PMC article.

5

Expansion of the RNAStructuromeDB to include secondary structural data spanning the human protein-coding transcriptome.

Rouse WB, O'Leary CA, Booher NJ, Moss WN. Rouse WB, et al. Sci Rep. 2022 Aug 25;12(1):14515. doi: 10.1038/s41598-022-18699-3. Sci Rep. 2022. PMID: 36008510 Free PMC article.

6

ScanFold 2.0: a rapid approach for identifying potential structured RNA targets in genomes and transcriptomes.

Andrews RJ, Rouse WB, O'Leary CA, Booher NJ, Moss WN. Andrews RJ, et al. Among authors: rouse wb. PeerJ. 2022 Nov 8;10:e14361. doi: 10.7717/peerj.14361. eCollection 2022. PeerJ. 2022. PMID: 36389431 Free PMC article.

7

Analysis of key genes in Mycobacterium ulcerans reveals conserved RNA structural motifs and regions with apparent pressure to remain unstructured.

Rouse WB, Gart J, Peysakhova L, Moss WN. Rouse WB, et al. Front Trop Dis. 2022;3:1009362. doi: 10.3389/fitd.2022.1009362. Epub 2022 Oct 13. Front Trop Dis. 2022. PMID: 37006713 Free PMC article.

8

Correction to "Transcriptome-Wide Mapping of Small-Molecule RNA-Binding Sites in Cells Informs an Isoform-Specific Degrader of QSOX1 mRNA".

Tong Y, Gibaut QMR, Rouse W, Childs-Disney JL, Suresh BM, Abegg D, Choudhary S, Akahori Y, Adibekian A, Moss WN, Disney MD. Tong Y, et al. J Am Chem Soc. 2023 Apr 26;145(16):9364. doi: 10.1021/jacs.3c02644. Epub 2023 Apr 14. J Am Chem Soc. 2023. PMID: 37058601 No abstract available.

9

Identification of MYC intron 2 regions that modulate expression.

Tompkins VS, Xue Z, Peterson JM, Rouse WB, O'Leary CA, Moss WN. Tompkins VS, et al. Among authors: rouse wb. PLoS One. 2024 Jan 18;19(1):e0296889. doi: 10.1371/journal.pone.0296889. eCollection 2024. PLoS One. 2024. PMID: 38236931 Free PMC article.

10

The RNA secondary structure of androgen receptor-FL and V7 transcripts reveals novel regulatory regions.

Rouse WB, Tompkins VS, O'Leary CA, Moss WN. Rouse WB, et al. Nucleic Acids Res. 2024 Jun 24;52(11):6596-6613. doi: 10.1093/nar/gkae220. Nucleic Acids Res. 2024. PMID: 38554103 Free PMC article.

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