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Elevated inflammatory fecal immune factors in men who have sex with men with HIV associate with microbiome composition and gut barrier function.
Littlefield KM, Schneider JM, Neff CP, Soesanto V, Siebert JC, Nusbacher NM, Moreno-Huizar N, Cartwright IM, Armstrong AJS, Colgen SP, Lozupone CA, Palmer BE. Littlefield KM, et al. Among authors: lozupone ca. Front Immunol. 2022 Dec 20;13:1072720. doi: 10.3389/fimmu.2022.1072720. eCollection 2022. Front Immunol. 2022. PMID: 36605218 Free PMC article.
Evolution of mammals and their gut microbes.
Ley RE, Hamady M, Lozupone C, Turnbaugh PJ, Ramey RR, Bircher JS, Schlegel ML, Tucker TA, Schrenzel MD, Knight R, Gordon JI. Ley RE, et al. Science. 2008 Jun 20;320(5883):1647-51. doi: 10.1126/science.1155725. Epub 2008 May 22. Science. 2008. PMID: 18497261 Free PMC article.
Obesity alters gut microbial ecology.
Ley RE, Bäckhed F, Turnbaugh P, Lozupone CA, Knight RD, Gordon JI. Ley RE, et al. Among authors: lozupone ca. Proc Natl Acad Sci U S A. 2005 Aug 2;102(31):11070-5. doi: 10.1073/pnas.0504978102. Epub 2005 Jul 20. Proc Natl Acad Sci U S A. 2005. PMID: 16033867 Free PMC article.
PyCogent: a toolkit for making sense from sequence.
Knight R, Maxwell P, Birmingham A, Carnes J, Caporaso JG, Easton BC, Eaton M, Hamady M, Lindsay H, Liu Z, Lozupone C, McDonald D, Robeson M, Sammut R, Smit S, Wakefield MJ, Widmann J, Wikman S, Wilson S, Ying H, Huttley GA. Knight R, et al. Genome Biol. 2007;8(8):R171. doi: 10.1186/gb-2007-8-8-r171. Genome Biol. 2007. PMID: 17708774 Free PMC article.
Size, constant sequences, and optimal selection.
Legiewicz M, Lozupone C, Knight R, Yarus M. Legiewicz M, et al. RNA. 2005 Nov;11(11):1701-9. doi: 10.1261/rna.2161305. Epub 2005 Sep 21. RNA. 2005. PMID: 16177137 Free PMC article.
106 results