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Page 1
Yield prediction through integration of genetic, environment, and management data through deep learning.
Kick DR, Wallace JG, Schnable JC, Kolkman JM, Alaca B, Beissinger TM, Edwards J, Ertl D, Flint-Garcia S, Gage JL, Hirsch CN, Knoll JE, de Leon N, Lima DC, Moreta DE, Singh MP, Thompson A, Weldekidan T, Washburn JD. Kick DR, et al. Among authors: lima dc. G3 (Bethesda). 2023 Apr 11;13(4):jkad006. doi: 10.1093/g3journal/jkad006. G3 (Bethesda). 2023. PMID: 36625555 Free PMC article.
Maize genomes to fields (G2F): 2014-2017 field seasons: genotype, phenotype, climatic, soil, and inbred ear image datasets.
McFarland BA, AlKhalifah N, Bohn M, Bubert J, Buckler ES, Ciampitti I, Edwards J, Ertl D, Gage JL, Falcon CM, Flint-Garcia S, Gore MA, Graham C, Hirsch CN, Holland JB, Hood E, Hooker D, Jarquin D, Kaeppler SM, Knoll J, Kruger G, Lauter N, Lee EC, Lima DC, Lorenz A, Lynch JP, McKay J, Miller ND, Moose SP, Murray SC, Nelson R, Poudyal C, Rocheford T, Rodriguez O, Romay MC, Schnable JC, Schnable PS, Scully B, Sekhon R, Silverstein K, Singh M, Smith M, Spalding EP, Springer N, Thelen K, Thomison P, Tuinstra M, Wallace J, Walls R, Wills D, Wisser RJ, Xu W, Yeh CT, de Leon N. McFarland BA, et al. Among authors: lima dc. BMC Res Notes. 2020 Feb 12;13(1):71. doi: 10.1186/s13104-020-4922-8. BMC Res Notes. 2020. PMID: 32051026 Free PMC article.
2018-2019 field seasons of the Maize Genomes to Fields (G2F) G x E project.
Lima DC, Aviles AC, Alpers RT, McFarland BA, Kaeppler S, Ertl D, Romay MC, Gage JL, Holland J, Beissinger T, Bohn M, Buckler E, Edwards J, Flint-Garcia S, Hirsch CN, Hood E, Hooker DC, Knoll JE, Kolkman JM, Liu S, McKay J, Minyo R, Moreta DE, Murray SC, Nelson R, Schnable JC, Sekhon RS, Singh MP, Thomison P, Thompson A, Tuinstra M, Wallace J, Washburn JD, Weldekidan T, Wisser RJ, Xu W, de Leon N. Lima DC, et al. BMC Genom Data. 2023 May 25;24(1):29. doi: 10.1186/s12863-023-01129-2. BMC Genom Data. 2023. PMID: 37231352 Free PMC article.
Genomes to Fields 2022 Maize genotype by Environment Prediction Competition.
Lima DC, Washburn JD, Varela JI, Chen Q, Gage JL, Romay MC, Holland J, Ertl D, Lopez-Cruz M, Aguate FM, de Los Campos G, Kaeppler S, Beissinger T, Bohn M, Buckler E, Edwards J, Flint-Garcia S, Gore MA, Hirsch CN, Knoll JE, McKay J, Minyo R, Murray SC, Ortez OA, Schnable JC, Sekhon RS, Singh MP, Sparks EE, Thompson A, Tuinstra M, Wallace J, Weldekidan T, Xu W, de Leon N. Lima DC, et al. BMC Res Notes. 2023 Jul 17;16(1):148. doi: 10.1186/s13104-023-06421-z. BMC Res Notes. 2023. PMID: 37461058 Free PMC article.
2020-2021 field seasons of Maize GxE project within the Genomes to Fields Initiative.
Lima DC, Aviles AC, Alpers RT, Perkins A, Schoemaker DL, Costa M, Michel KJ, Kaeppler S, Ertl D, Romay MC, Gage JL, Holland J, Beissinger T, Bohn M, Buckler E, Edwards J, Flint-Garcia S, Gore MA, Hirsch CN, Knoll JE, McKay J, Minyo R, Murray SC, Schnable J, Sekhon RS, Singh MP, Sparks EE, Thomison P, Thompson A, Tuinstra M, Wallace J, Washburn JD, Weldekidan T, Xu W, de Leon N. Lima DC, et al. BMC Res Notes. 2023 Sep 14;16(1):219. doi: 10.1186/s13104-023-06430-y. BMC Res Notes. 2023. PMID: 37710302 Free PMC article.
Global Genotype by Environment Prediction Competition Reveals That Diverse Modeling Strategies Can Deliver Satisfactory Maize Yield Estimates.
Washburn JD, Varela JI, Xavier A, Chen Q, Ertl D, Gage JL, Holland JB, Lima DC, Romay MC, Lopez-Cruz M, de Los Campos G, Barber W, Zimmer C, Silva IT, Rocha F, Rincent R, Ali B, Hu H, Runcie DE, Gusev K, Slabodkin A, Bax P, Aubert J, Gangloff H, Mary-Huard T, Vanrenterghem T, Quesada-Traver C, Yates S, Ariza-Suárez D, Ulrich A, Wyler M, Kick DR, Bellis ES, Causey JL, Chavez ES, Wang Y, Piyush V, Fernando GD, Hu RK, Kumar R, Timon AJ, Venkatesh R, Abá KS, Chen H, Ranaweera T, Shiu SH, Wang P, Gordon MJ, Amos BK, Busato S, Perondi D, Gogna A, Psaroudakis D, Chen CPJ, Al-Mamun HA, Danilevicz MF, Upadhyaya SR, Edwards D, de Leon N. Washburn JD, et al. Among authors: lima dc. bioRxiv [Preprint]. 2024 Sep 19:2024.09.13.612969. doi: 10.1101/2024.09.13.612969. bioRxiv. 2024. Update in: Genetics. 2024 Nov 22:iyae195. doi: 10.1093/genetics/iyae195 PMID: 39345633 Free PMC article. Updated. Preprint.
Global Genotype by Environment Prediction Competition Reveals That Diverse Modeling Strategies Can Deliver Satisfactory Maize Yield Estimates.
Washburn JD, Varela JI, Xavier A, Chen Q, Ertl D, Gage JL, Holland JB, Lima DC, Romay MC, Lopez-Cruz M, de Los Campos G, Barber W, Zimmer C, Trucillo Silva I, Rocha F, Rincent R, Ali B, Hu H, Runcie DE, Gusev K, Slabodkin A, Bax P, Aubert J, Gangloff H, Mary-Huard T, Vanrenterghem T, Quesada-Traver C, Yates S, Ariza-Suárez D, Ulrich A, Wyler M, Kick DR, Bellis ES, Causey JL, Soriano Chavez E, Wang Y, Piyush V, Fernando GD, Hu RK, Kumar R, Timon AJ, Venkatesh R, Segura Abá K, Chen H, Ranaweera T, Shiu SH, Wang P, Gordon MJ, Amos BK, Busato S, Perondi D, Gogna A, Psaroudakis D, Chen CPJ, Al-Mamun HA, Danilevicz MF, Upadhyaya SR, Edwards D, de Leon N. Washburn JD, et al. Among authors: lima dc. Genetics. 2024 Nov 22:iyae195. doi: 10.1093/genetics/iyae195. Online ahead of print. Genetics. 2024. PMID: 39576009
115 results