Ayati M - Search Results

1

Differences in intracellular protein levels in monocytes and CD4⁺ lymphocytes between bipolar depressed patients and healthy controls: A pilot study with tyramine-based signal-amplified flow cytometry.

Gao K, Ayati M, Kaye NM, Koyuturk M, Calabrese JR, Ganocy SJ, Lazarus HM, Christian E, Kaplan D. Gao K, et al. Among authors: ayati m. J Affect Disord. 2023 May 1;328:116-127. doi: 10.1016/j.jad.2023.02.058. Epub 2023 Feb 16. J Affect Disord. 2023. PMID: 36806598

2

PoCos: Population Covering Locus Sets for Risk Assessment in Complex Diseases.

Ayati M, Koyutürk M. Ayati M, et al. PLoS Comput Biol. 2016 Nov 11;12(11):e1005195. doi: 10.1371/journal.pcbi.1005195. eCollection 2016 Nov. PLoS Comput Biol. 2016. PMID: 27835645 Free PMC article.

3

MOBAS: identification of disease-associated protein subnetworks using modularity-based scoring.

Ayati M, Erten S, Chance MR, Koyutürk M. Ayati M, et al. EURASIP J Bioinform Syst Biol. 2015 Jun 30;2015:7. doi: 10.1186/s13637-015-0025-6. eCollection 2015 Dec. EURASIP J Bioinform Syst Biol. 2015. PMID: 28194175 Free PMC article.

4

Phosphoproteomics Profiling of Nonsmall Cell Lung Cancer Cells Treated with a Novel Phosphatase Activator.

Wiredja DD, Ayati M, Mazhar S, Sangodkar J, Maxwell S, Schlatzer D, Narla G, Koyutürk M, Chance MR. Wiredja DD, et al. Among authors: ayati m. Proteomics. 2017 Nov;17(22):10.1002/pmic.201700214. doi: 10.1002/pmic.201700214. Epub 2017 Oct 25. Proteomics. 2017. PMID: 28961369 Free PMC article.

5

ELF3 is an antagonist of oncogenic-signalling-induced expression of EMT-TF ZEB1.

Liu D, Skomorovska Y, Song J, Bowler E, Harris R, Ravasz M, Bai S, Ayati M, Tamai K, Koyuturk M, Yuan X, Wang Z, Wang Y, Ewing RM. Liu D, et al. Among authors: ayati m. Cancer Biol Ther. 2019;20(1):90-100. doi: 10.1080/15384047.2018.1507256. Epub 2018 Aug 27. Cancer Biol Ther. 2019. PMID: 30148686 Free PMC article.

6

CoPhosK: A method for comprehensive kinase substrate annotation using co-phosphorylation analysis.

Ayati M, Wiredja D, Schlatzer D, Maxwell S, Li M, Koyutürk M, Chance MR. Ayati M, et al. PLoS Comput Biol. 2019 Feb 27;15(2):e1006678. doi: 10.1371/journal.pcbi.1006678. eCollection 2019 Feb. PLoS Comput Biol. 2019. PMID: 30811403 Free PMC article.

7

Co-phosphorylation networks reveal subtype-specific signaling modules in breast cancer.

Ayati M, Chance MR, Koyutürk M. Ayati M, et al. Bioinformatics. 2021 Apr 19;37(2):221-228. doi: 10.1093/bioinformatics/btaa678. Bioinformatics. 2021. PMID: 32730576 Free PMC article.

8

Robust inference of kinase activity using functional networks.

Yılmaz S, Ayati M, Schlatzer D, Çiçek AE, Chance MR, Koyutürk M. Yılmaz S, et al. Among authors: ayati m. Nat Commun. 2021 Feb 19;12(1):1177. doi: 10.1038/s41467-021-21211-6. Nat Commun. 2021. PMID: 33608514 Free PMC article.

9

Protein Biomarkers in Monocytes and CD4⁺ Lymphocytes for Predicting Lithium Treatment Response of Bipolar Disorder: a Feasibility Study with Tyramine-Based Signal-Amplified Flow Cytometry.

Gao K, Ayati M, Koyuturk M, Calabrese JR, Ganocy SJ, Kaye NM, Lazarus HM, Christian E, Kaplan D. Gao K, et al. Among authors: ayati m. Psychopharmacol Bull. 2022 Feb 25;52(1):8-35. Psychopharmacol Bull. 2022. PMID: 35342205 Free PMC article.

10

Functional characterization of co-phosphorylation networks.

Ayati M, Yılmaz S, Chance MR, Koyuturk M. Ayati M, et al. Bioinformatics. 2022 Aug 2;38(15):3785-3793. doi: 10.1093/bioinformatics/btac406. Bioinformatics. 2022. PMID: 35731218 Free PMC article.

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