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Page 1
Accelerating crystal structure determination with iterative AlphaFold prediction.
Terwilliger TC, Afonine PV, Liebschner D, Croll TI, McCoy AJ, Oeffner RD, Williams CJ, Poon BK, Richardson JS, Read RJ, Adams PD. Terwilliger TC, et al. Among authors: poon bk. Acta Crystallogr D Struct Biol. 2023 Mar 1;79(Pt 3):234-244. doi: 10.1107/S205979832300102X. Epub 2023 Feb 27. Acta Crystallogr D Struct Biol. 2023. PMID: 36876433 Free PMC article.
Helium superfluidity. Shapes and vorticities of superfluid helium nanodroplets.
Gomez LF, Ferguson KR, Cryan JP, Bacellar C, Tanyag RM, Jones C, Schorb S, Anielski D, Belkacem A, Bernando C, Boll R, Bozek J, Carron S, Chen G, Delmas T, Englert L, Epp SW, Erk B, Foucar L, Hartmann R, Hexemer A, Huth M, Kwok J, Leone SR, Ma JH, Maia FR, Malmerberg E, Marchesini S, Neumark DM, Poon B, Prell J, Rolles D, Rudek B, Rudenko A, Seifrid M, Siefermann KR, Sturm FP, Swiggers M, Ullrich J, Weise F, Zwart P, Bostedt C, Gessner O, Vilesov AF. Gomez LF, et al. Science. 2014 Aug 22;345(6199):906-9. doi: 10.1126/science.1252395. Science. 2014. PMID: 25146284
Polder maps: improving OMIT maps by excluding bulk solvent.
Liebschner D, Afonine PV, Moriarty NW, Poon BK, Sobolev OV, Terwilliger TC, Adams PD. Liebschner D, et al. Among authors: poon bk. Acta Crystallogr D Struct Biol. 2017 Feb 1;73(Pt 2):148-157. doi: 10.1107/S2059798316018210. Epub 2017 Feb 1. Acta Crystallogr D Struct Biol. 2017. PMID: 28177311 Free PMC article.
Real-space refinement in PHENIX for cryo-EM and crystallography.
Afonine PV, Poon BK, Read RJ, Sobolev OV, Terwilliger TC, Urzhumtsev A, Adams PD. Afonine PV, et al. Among authors: poon bk. Acta Crystallogr D Struct Biol. 2018 Jun 1;74(Pt 6):531-544. doi: 10.1107/S2059798318006551. Epub 2018 May 30. Acta Crystallogr D Struct Biol. 2018. PMID: 29872004 Free PMC article.
New tools for the analysis and validation of cryo-EM maps and atomic models.
Afonine PV, Klaholz BP, Moriarty NW, Poon BK, Sobolev OV, Terwilliger TC, Adams PD, Urzhumtsev A. Afonine PV, et al. Among authors: poon bk. Acta Crystallogr D Struct Biol. 2018 Sep 1;74(Pt 9):814-840. doi: 10.1107/S2059798318009324. Epub 2018 Sep 3. Acta Crystallogr D Struct Biol. 2018. PMID: 30198894 Free PMC article.
Announcing mandatory submission of PDBx/mmCIF format files for crystallographic depositions to the Protein Data Bank (PDB).
Adams PD, Afonine PV, Baskaran K, Berman HM, Berrisford J, Bricogne G, Brown DG, Burley SK, Chen M, Feng Z, Flensburg C, Gutmanas A, Hoch JC, Ikegawa Y, Kengaku Y, Krissinel E, Kurisu G, Liang Y, Liebschner D, Mak L, Markley JL, Moriarty NW, Murshudov GN, Noble M, Peisach E, Persikova I, Poon BK, Sobolev OV, Ulrich EL, Velankar S, Vonrhein C, Westbrook J, Wojdyr M, Yokochi M, Young JY. Adams PD, et al. Among authors: poon bk. Acta Crystallogr D Struct Biol. 2019 Apr 1;75(Pt 4):451-454. doi: 10.1107/S2059798319004522. Epub 2019 Apr 8. Acta Crystallogr D Struct Biol. 2019. PMID: 30988261 Free PMC article.
Cryo_fit: Democratization of flexible fitting for cryo-EM.
Kim DN, Moriarty NW, Kirmizialtin S, Afonine PV, Poon B, Sobolev OV, Adams PD, Sanbonmatsu K. Kim DN, et al. J Struct Biol. 2019 Oct 1;208(1):1-6. doi: 10.1016/j.jsb.2019.05.012. Epub 2019 Jul 3. J Struct Biol. 2019. PMID: 31279069 Free PMC article.
35 results