Zhou W - Search Results

1

Immune activation and exhaustion marker expression on T-cell subsets in ART-treated adolescents and young adults with perinatal HIV-1 infection as correlates of viral persistence.

Huang Y, Dhummakupt A, Khetan P, Nilles T, Zhou W, Mudvari P, Szewczyk J, Chen YH, Boritz E, Ji H, Agwu A, Persaud D. Huang Y, et al. Among authors: zhou w. Front Immunol. 2023 Mar 23;14:1007626. doi: 10.3389/fimmu.2023.1007626. eCollection 2023. Front Immunol. 2023. PMID: 37033916 Free PMC article.

2

Computational Prediction of the Global Functional Genomic Landscape: Applications, Methods, and Challenges.

Zhou W, Sherwood B, Ji H. Zhou W, et al. Hum Hered. 2016;81(2):88-105. doi: 10.1159/000450827. Epub 2017 Jan 12. Hum Hered. 2016. PMID: 28076869 Free PMC article. Review.

3

Single-cell regulome data analysis by SCRAT.

Ji Z, Zhou W, Ji H. Ji Z, et al. Among authors: zhou w. Bioinformatics. 2017 Sep 15;33(18):2930-2932. doi: 10.1093/bioinformatics/btx315. Bioinformatics. 2017. PMID: 28505247 Free PMC article.

4

Genome-wide prediction of DNase I hypersensitivity using gene expression.

Zhou W, Sherwood B, Ji Z, Xue Y, Du F, Bai J, Ying M, Ji H. Zhou W, et al. Nat Commun. 2017 Oct 19;8(1):1038. doi: 10.1038/s41467-017-01188-x. Nat Commun. 2017. PMID: 29051481 Free PMC article.

5

Sequential Enhancer Sequestration Dysregulates Recombination Center Formation at the IgH Locus.

Qiu X, Kumari G, Gerasimova T, Du H, Labaran L, Singh A, De S, Wood WH 3rd, Becker KG, Zhou W, Ji H, Sen R. Qiu X, et al. Among authors: zhou w. Mol Cell. 2018 Apr 5;70(1):21-33.e6. doi: 10.1016/j.molcel.2018.02.020. Epub 2018 Mar 22. Mol Cell. 2018. PMID: 29576529 Free PMC article.

6

Transcriptional outcomes and kinetic patterning of gene expression in response to NF-κB activation.

Zhao M, Joy J, Zhou W, De S, Wood WH 3rd, Becker KG, Ji H, Sen R. Zhao M, et al. Among authors: zhou w. PLoS Biol. 2018 Sep 10;16(9):e2006347. doi: 10.1371/journal.pbio.2006347. eCollection 2018 Sep. PLoS Biol. 2018. PMID: 30199532 Free PMC article.

7

Sex differences in gene regulation in the dorsal root ganglion after nerve injury.

Stephens KE, Zhou W, Ji Z, Chen Z, He S, Ji H, Guan Y, Taverna SD. Stephens KE, et al. Among authors: zhou w. BMC Genomics. 2019 Feb 19;20(1):147. doi: 10.1186/s12864-019-5512-9. BMC Genomics. 2019. PMID: 30782122 Free PMC article.

8

Global prediction of chromatin accessibility using small-cell-number and single-cell RNA-seq.

Zhou W, Ji Z, Fang W, Ji H. Zhou W, et al. Nucleic Acids Res. 2019 Nov 4;47(19):e121. doi: 10.1093/nar/gkz716. Nucleic Acids Res. 2019. PMID: 31428792 Free PMC article.

9

GLI transcriptional repression regulates tissue-specific enhancer activity in response to Hedgehog signaling.

Lex RK, Ji Z, Falkenstein KN, Zhou W, Henry JL, Ji H, Vokes SA. Lex RK, et al. Among authors: zhou w. Elife. 2020 Jan 28;9:e50670. doi: 10.7554/eLife.50670. Elife. 2020. PMID: 31989924 Free PMC article.

10

Single-cell ATAC-seq signal extraction and enhancement with SCATE.

Ji Z, Zhou W, Hou W, Ji H. Ji Z, et al. Among authors: zhou w. Genome Biol. 2020 Jul 3;21(1):161. doi: 10.1186/s13059-020-02075-3. Genome Biol. 2020. PMID: 32620137 Free PMC article.

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