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Page 1
Building pangenome graphs.
Garrison E, Guarracino A, Heumos S, Villani F, Bao Z, Tattini L, Hagmann J, Vorbrugg S, Marco-Sola S, Kubica C, Ashbrook DG, Thorell K, Rusholme-Pilcher RL, Liti G, Rudbeck E, Nahnsen S, Yang Z, Mwaniki MN, Nobrega FL, Wu Y, Chen H, de Ligt J, Sudmant PH, Soranzo N, Colonna V, Williams RW, Prins P. Garrison E, et al. Among authors: tattini l. bioRxiv [Preprint]. 2024 Oct 2:2023.04.05.535718. doi: 10.1101/2023.04.05.535718. bioRxiv. 2024. Update in: Nat Methods. 2024 Nov;21(11):2008-2012. doi: 10.1038/s41592-024-02430-3. PMID: 37066137 Free PMC article. Updated. Preprint.
phyBWT2: phylogeny reconstruction via eBWT positional clustering.
Guerrini V, Conte A, Grossi R, Liti G, Rosone G, Tattini L. Guerrini V, et al. Among authors: tattini l. Algorithms Mol Biol. 2023 Aug 3;18(1):11. doi: 10.1186/s13015-023-00232-4. Algorithms Mol Biol. 2023. PMID: 37537624 Free PMC article.
Ancient and recent origins of shared polymorphisms in yeast.
Tellini N, De Chiara M, Mozzachiodi S, Tattini L, Vischioni C, Naumova ES, Warringer J, Bergström A, Liti G. Tellini N, et al. Among authors: tattini l. Nat Ecol Evol. 2024 Apr;8(4):761-776. doi: 10.1038/s41559-024-02352-5. Epub 2024 Mar 12. Nat Ecol Evol. 2024. PMID: 38472432
Telomere-to-telomere assemblies of 142 strains characterize the genome structural landscape in Saccharomyces cerevisiae.
O'Donnell S, Yue JX, Saada OA, Agier N, Caradec C, Cokelaer T, De Chiara M, Delmas S, Dutreux F, Fournier T, Friedrich A, Kornobis E, Li J, Miao Z, Tattini L, Schacherer J, Liti G, Fischer G. O'Donnell S, et al. Among authors: tattini l. Nat Genet. 2023 Aug;55(8):1390-1399. doi: 10.1038/s41588-023-01459-y. Epub 2023 Jul 31. Nat Genet. 2023. PMID: 37524789 Free PMC article.
Aborting meiosis allows recombination in sterile diploid yeast hybrids.
Mozzachiodi S, Tattini L, Llored A, Irizar A, Škofljanc N, D'Angiolo M, De Chiara M, Barré BP, Yue JX, Lutazi A, Loeillet S, Laureau R, Marsit S, Stenberg S, Albaud B, Persson K, Legras JL, Dequin S, Warringer J, Nicolas A, Liti G. Mozzachiodi S, et al. Among authors: tattini l. Nat Commun. 2021 Nov 12;12(1):6564. doi: 10.1038/s41467-021-26883-8. Nat Commun. 2021. PMID: 34772931 Free PMC article.
Building pangenome graphs.
Garrison E, Guarracino A, Heumos S, Villani F, Bao Z, Tattini L, Hagmann J, Vorbrugg S, Marco-Sola S, Kubica C, Ashbrook DG, Thorell K, Rusholme-Pilcher RL, Liti G, Rudbeck E, Golicz AA, Nahnsen S, Yang Z, Mwaniki MN, Nobrega FL, Wu Y, Chen H, de Ligt J, Sudmant PH, Huang S, Weigel D, Soranzo N, Colonna V, Williams RW, Prins P. Garrison E, et al. Among authors: tattini l. Nat Methods. 2024 Nov;21(11):2008-2012. doi: 10.1038/s41592-024-02430-3. Epub 2024 Oct 21. Nat Methods. 2024. PMID: 39433878
21 results