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Evaluation of variant calling algorithms for wastewater-based epidemiology using mixed populations of SARS-CoV-2 variants in synthetic and wastewater samples.
Bassano I, Ramachandran VK, Khalifa MS, Lilley CJ, Brown MR, van Aerle R, Denise H, Rowe W, George A, Cairns E, Wierzbicki C, Pickwell ND, Carlile M, Holmes N, Payne A, Loose M, Burke TA, Paterson S, Wade MJ, Grimsley JMS. Bassano I, et al. Among authors: khalifa ms. Microb Genom. 2023 Apr;9(4):mgen000933. doi: 10.1099/mgen.0.000933. Microb Genom. 2023. PMID: 37074153 Free PMC article.
Rapid Assessment of SARS-CoV-2 Variant-Associated Mutations in Wastewater Using Real-Time RT-PCR.
Farkas K, Pellett C, Williams R, Alex-Sanders N, Bassano I, Brown MR, Denise H, Grimsley JMS, Kevill JL, Khalifa MS, Pântea I, Story R, Wade MJ, Woodhall N, Jones DL. Farkas K, et al. Among authors: khalifa ms. Microbiol Spectr. 2023 Feb 14;11(1):e0317722. doi: 10.1128/spectrum.03177-22. Epub 2023 Jan 11. Microbiol Spectr. 2023. PMID: 36629447 Free PMC article.
A preliminary investigation of rabbit carcass decomposition and attracted ants (Hymenoptera: Formicidae) on the seaward coastal beach of Al-Jubail City, Saudi Arabia.
Al-Qurashi AS, Mashaly AM, Alajmi R, Al-Khalifa MS, Mansour L, Al-Omar SY, Sharaf MR, Aldawood AS, Al-Dhafer HM, Hunter T, Almutawa MY, Ahmed AM. Al-Qurashi AS, et al. Among authors: al khalifa ms. J Med Entomol. 2024 Mar 13;61(2):318-330. doi: 10.1093/jme/tjad162. J Med Entomol. 2024. PMID: 38104252
Decomposition and dipteran succession on buried rabbits carcasses.
Al-Zahrani O, Al-Khalifa MS, Al-Qahtni AH, Al-Mekhlafi FA. Al-Zahrani O, et al. Among authors: al khalifa ms. Saudi J Biol Sci. 2023 Nov;30(11):103822. doi: 10.1016/j.sjbs.2023.103822. Epub 2023 Oct 5. Saudi J Biol Sci. 2023. PMID: 37869362 Free PMC article.
City-wide wastewater genomic surveillance through the successive emergence of SARS-CoV-2 Alpha and Delta variants.
Brunner FS, Brown MR, Bassano I, Denise H, Khalifa MS, Wade MJ, van Aerle R, Kevill JL, Jones DL, Farkas K, Jeffries AR; COVID-19 Genomics UK (COG-UK) Consortium; Cairns E, Wierzbicki C, Paterson S. Brunner FS, et al. Among authors: khalifa ms. Water Res. 2022 Nov 1;226:119306. doi: 10.1016/j.watres.2022.119306. Epub 2022 Oct 28. Water Res. 2022. PMID: 36369689 Free PMC article.
54 results