Sachs K - Search Results

1

CD69 marks a subpopulation of acute myeloid leukemia with enhanced colony forming capacity and a unique signaling activation state.

Antony ML, Chang D, Noble-Orcutt KE, Kay A, Jensen JL, Mohei H, Myers CL, Sachs K, Sachs Z. Antony ML, et al. Among authors: sachs k. Leuk Lymphoma. 2023 Jul-Aug;64(7):1262-1274. doi: 10.1080/10428194.2023.2207698. Epub 2023 May 10. Leuk Lymphoma. 2023. PMID: 37161853

2

Identifying patterns in amyotrophic lateral sclerosis progression from sparse longitudinal data.

Ramamoorthy D, Severson K, Ghosh S, Sachs K; Answer ALS; Glass JD, Fournier CN; Pooled Resource Open-Access ALS Clinical Trials Consortium; ALS/MND Natural History Consortium; Herrington TM, Berry JD, Ng K, Fraenkel E. Ramamoorthy D, et al. Among authors: sachs k. Nat Comput Sci. 2022 Sep;2(9):605-616. doi: 10.1038/s43588-022-00299-w. Epub 2022 Sep 8. Nat Comput Sci. 2022. PMID: 38177466 Free PMC article.

3

Optimal adjustment sets for causal query estimation in partially observed biomolecular networks.

Mohammad-Taheri S, Tewari V, Kapre R, Rahiminasab E, Sachs K, Taply Hoyt C, Zucker J, Vitek O. Mohammad-Taheri S, et al. Among authors: sachs k. Bioinformatics. 2023 Jun 30;39(39 Suppl 1):i494-i503. doi: 10.1093/bioinformatics/btad270. Bioinformatics. 2023. PMID: 37387179 Free PMC article.

4

Eliater: a Python package for estimating outcomes of perturbations in biomolecular networks.

Mohammad-Taheri S, Navada PP, Hoyt CT, Zucker J, Sachs K, Gyori BM, Vitek O. Mohammad-Taheri S, et al. Among authors: sachs k. Bioinformatics. 2024 Sep 2;40(9):btae527. doi: 10.1093/bioinformatics/btae527. Bioinformatics. 2024. PMID: 39187941 Free PMC article.

5

Single-cell, spatial, and fate-mapping analyses uncover niche dependent diversity of cochlear myeloid cells.

Chiot A, Felgner MJ, Brownell D, Rott KH, Bogachuk A, Rosmus DD, Masuda T, Ching A, Atkinson PJ, Prinz M, Sachs K, Cheng AG, Wieghofer P, Ajami B. Chiot A, et al. Among authors: sachs k. bioRxiv [Preprint]. 2024 Nov 2:2024.10.30.621184. doi: 10.1101/2024.10.30.621184. bioRxiv. 2024. PMID: 39554030 Free PMC article. Preprint.

6

Disease related changes in ATAC-seq of iPSC-derived motor neuron lines from ALS patients and controls.

Tsitkov S, Valentine K, Kozareva V, Donde A, Frank A, Lei S; Answer ALS Consortium; E Van Eyk J, Finkbeiner S, Rothstein JD, Thompson LM, Sareen D, Svendsen CN, Fraenkel E. Tsitkov S, et al. Nat Commun. 2024 May 2;15(1):3606. doi: 10.1038/s41467-024-47758-8. Nat Commun. 2024. PMID: 38697975 Free PMC article.

7

NeuroLINCS Proteomics: Defining human-derived iPSC proteomes and protein signatures of pluripotency.

Matlock AD, Vaibhav V, Holewinski R, Venkatraman V, Dardov V, Manalo DM, Shelley B, Ornelas L, Banuelos M, Mandefro B, Escalante-Chong R, Li J, Finkbeiner S, Fraenkel E, Rothstein J, Thompson L, Sareen D, Svendsen CN; NIH NeuroLINCS Consortium; Van Eyk JE. Matlock AD, et al. Sci Data. 2023 Jan 11;10(1):24. doi: 10.1038/s41597-022-01687-7. Sci Data. 2023. PMID: 36631473 Free PMC article.

8

Peripheral T-Cells, B-Cells, and Monocytes from Multiple Sclerosis Patients Supplemented with High-Dose Vitamin D Show Distinct Changes in Gene Expression Profiles.

Kim D, Witt EE, Schubert S, Sotirchos E, Bhargava P, Mowry EM, Sachs K, Bilen B, Steinman L, Awani A, He Z, Calabresi PA, Van Haren K. Kim D, et al. Among authors: sachs k. Nutrients. 2022 Nov 9;14(22):4737. doi: 10.3390/nu14224737. Nutrients. 2022. PMID: 36432424 Free PMC article. Clinical Trial.

9

Do-calculus enables estimation of causal effects in partially observed biomolecular pathways.

Mohammad-Taheri S, Zucker J, Hoyt CT, Sachs K, Tewari V, Ness R, Vitek O. Mohammad-Taheri S, et al. Among authors: sachs k. Bioinformatics. 2022 Jun 24;38(Suppl 1):i350-i358. doi: 10.1093/bioinformatics/btac251. Bioinformatics. 2022. PMID: 35758817 Free PMC article.

10

Variation of Immune Cell Responses in Humans Reveals Sex-Specific Coordinated Signaling Across Cell Types.

Fragiadakis GK, Bjornson-Hooper ZB, Madhireddy D, Sachs K, Chen H, McIlwain DR, Spitzer MH, Bendall SC, Nolan GP. Fragiadakis GK, et al. Among authors: sachs k. Front Immunol. 2022 Mar 28;13:867016. doi: 10.3389/fimmu.2022.867016. eCollection 2022. Front Immunol. 2022. PMID: 35419006 Free PMC article.

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