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223 results

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A revamped rat reference genome improves the discovery of genetic diversity in laboratory rats.
de Jong TV, Pan Y, Rastas P, Munro D, Tutaj M, Akil H, Benner C, Chen D, Chitre AS, Chow W, Colonna V, Dalgard CL, Demos WM, Doris PA, Garrison E, Geurts AM, Gunturkun HM, Guryev V, Hourlier T, Howe K, Huang J, Kalbfleisch T, Kim P, Li L, Mahaffey S, Martin FJ, Mohammadi P, Ozel AB, Polesskaya O, Pravenec M, Prins P, Sebat J, Smith JR, Solberg Woods LC, Tabakoff B, Tracey A, Uliano-Silva M, Villani F, Wang H, Sharp BM, Telese F, Jiang Z, Saba L, Wang X, Murphy TD, Palmer AA, Kwitek AE, Dwinell MR, Williams RW, Li JZ, Chen H. de Jong TV, et al. Among authors: benner c. bioRxiv [Preprint]. 2023 Sep 28:2023.04.13.536694. doi: 10.1101/2023.04.13.536694. bioRxiv. 2023. Update in: Cell Genom. 2024 Apr 10;4(4):100527. doi: 10.1016/j.xgen.2024.100527 PMID: 37214860 Free PMC article. Updated. Preprint.
Breakthrough infections by SARS-CoV-2 variants boost cross-reactive hybrid immune responses in mRNA-vaccinated Golden Syrian Hamsters.
García-Bernalt Diego J, Singh G, Jangra S, Handrejk K, Laporte M, Chang LA, El Zahed SS, Pache L, Chang MW, Warang P, Aslam S, Mena I, Webb BT, Benner C, García-Sastre A, Schotsaert M. García-Bernalt Diego J, et al. Among authors: benner c. bioRxiv [Preprint]. 2023 May 23:2023.05.22.541294. doi: 10.1101/2023.05.22.541294. bioRxiv. 2023. Update in: PLoS Pathog. 2024 Jan 10;20(1):e1011805. doi: 10.1371/journal.ppat.1011805 PMID: 37425792 Free PMC article. Updated. Preprint.
Population-specific putative causal variants shape quantitative traits.
Koyama S, Liu X, Koike Y, Hikino K, Koido M, Li W, Akaki K, Tomizuka K, Ito S, Otomo N, Suetsugu H, Yoshino S, Akiyama M, Saito K, Ishikawa Y, Benner C, Natarajan P, Ellinor PT, Mushiroda T, Horikoshi M, Ikeda M, Iwata N, Matsuda K; Biobank Japan Project; Niida S, Ozaki K, Momozawa Y, Ikegawa S, Takeuchi O, Ito K, Terao C. Koyama S, et al. Among authors: benner c. Nat Genet. 2024 Oct;56(10):2027-2035. doi: 10.1038/s41588-024-01913-5. Epub 2024 Oct 3. Nat Genet. 2024. PMID: 39363016 Free PMC article.
The Wild West of spike-in normalization.
Patel LA, Cao Y, Mendenhall EM, Benner C, Goren A. Patel LA, et al. Among authors: benner c. Nat Biotechnol. 2024 Sep;42(9):1343-1349. doi: 10.1038/s41587-024-02377-y. Nat Biotechnol. 2024. PMID: 39271835 No abstract available.
Position-dependent function of human sequence-specific transcription factors.
Duttke SH, Guzman C, Chang M, Delos Santos NP, McDonald BR, Xie J, Carlin AF, Heinz S, Benner C. Duttke SH, et al. Among authors: benner c. Nature. 2024 Jul;631(8022):891-898. doi: 10.1038/s41586-024-07662-z. Epub 2024 Jul 17. Nature. 2024. PMID: 39020164 Free PMC article.
223 results