Ali SS - Search Results

1

Structural vaccinology-based design of multi-epitopes vaccine against Streptococcus gordonii and validation using molecular modeling and immune simulation approaches.

Nasir SN, Iftikhar A, Zubair F, Alshammari A, Alharbi M, Alasmari AF, Khan A, Waseem M, Ali SS, Ali L, Waheed Y, Wei DQ. Nasir SN, et al. Among authors: ali l, ali ss. Heliyon. 2023 May 11;9(5):e16148. doi: 10.1016/j.heliyon.2023.e16148. eCollection 2023 May. Heliyon. 2023. PMID: 37234653 Free PMC article.

2

Allosteric ligands for the pharmacologically important Flavivirus target (NS5) from ZINC database based on pharmacophoric points, free energy calculations and dynamics correlation.

Khan A, Saleem S, Idrees M, Ali SS, Junaid M, Chandra Kaushik A, Wei DQ. Khan A, et al. Among authors: ali ss. J Mol Graph Model. 2018 Jun;82:37-47. doi: 10.1016/j.jmgm.2018.03.004. Epub 2018 Apr 11. J Mol Graph Model. 2018. PMID: 29677482

3

Computational identification, characterization and validation of potential antigenic peptide vaccines from hrHPVs E6 proteins using immunoinformatics and computational systems biology approaches.

Khan A, Junaid M, Kaushik AC, Ali A, Ali SS, Mehmood A, Wei DQ. Khan A, et al. Among authors: ali a, ali ss. PLoS One. 2018 May 1;13(5):e0196484. doi: 10.1371/journal.pone.0196484. eCollection 2018. PLoS One. 2018. PMID: 29715318 Free PMC article.

4

Immunoinformatic and systems biology approaches to predict and validate peptide vaccines against Epstein-Barr virus (EBV).

Ali A, Khan A, Kaushik AC, Wang Y, Ali SS, Junaid M, Saleem S, Cho WCS, Mao X, Wei DQ. Ali A, et al. Among authors: ali ss. Sci Rep. 2019 Jan 24;9(1):720. doi: 10.1038/s41598-018-37070-z. Sci Rep. 2019. PMID: 30679646 Free PMC article.

5

Immunoinformatics and structural vaccinology driven prediction of multi-epitope vaccine against Mayaro virus and validation through in-silico expression.

Khan S, Khan A, Rehman AU, Ahmad I, Ullah S, Khan AA, Ali SS, Afridi SG, Wei DQ. Khan S, et al. Among authors: ali ss. Infect Genet Evol. 2019 Sep;73:390-400. doi: 10.1016/j.meegid.2019.06.006. Epub 2019 Jun 4. Infect Genet Evol. 2019. PMID: 31173935

6

Dynamics Insights Into the Gain of Flexibility by Helix-12 in ESR1 as a Mechanism of Resistance to Drugs in Breast Cancer Cell Lines.

Khan A, Ashfaq-Ur-Rehman, Junaid M, Li CD, Saleem S, Humayun F, Shamas S, Ali SS, Babar Z, Wei DQ. Khan A, et al. Among authors: ali ss. Front Mol Biosci. 2020 Jan 24;6:159. doi: 10.3389/fmolb.2019.00159. eCollection 2019. Front Mol Biosci. 2020. PMID: 32039233 Free PMC article.

7

An Integrated Systems Biology and Network-Based Approaches to Identify Novel Biomarkers in Breast Cancer Cell Lines Using Gene Expression Data.

Khan A, Rehman Z, Hashmi HF, Khan AA, Junaid M, Sayaf AM, Ali SS, Hassan FU, Heng W, Wei DQ. Khan A, et al. Among authors: ali ss. Interdiscip Sci. 2020 Jun;12(2):155-168. doi: 10.1007/s12539-020-00360-0. Epub 2020 Feb 13. Interdiscip Sci. 2020. PMID: 32056139

8

Structural insights of catalytic mechanism in mutant pyrazinamidase of Mycobacterium tuberculosis.

Junaid M, Li CD, Li J, Khan A, Ali SS, Jamal SB, Saud S, Ali A, Wei DQ. Junaid M, et al. Among authors: ali a, ali ss. J Biomol Struct Dyn. 2021 Jun;39(9):3172-3185. doi: 10.1080/07391102.2020.1761879. Epub 2020 May 12. J Biomol Struct Dyn. 2021. PMID: 32340563

9

Combined drug repurposing and virtual screening strategies with molecular dynamics simulation identified potent inhibitors for SARS-CoV-2 main protease (3CLpro).

Khan A, Ali SS, Khan MT, Saleem S, Ali A, Suleman M, Babar Z, Shafiq A, Khan M, Wei DQ. Khan A, et al. Among authors: ali a, ali ss. J Biomol Struct Dyn. 2021 Aug;39(13):4659-4670. doi: 10.1080/07391102.2020.1779128. Epub 2020 Jun 18. J Biomol Struct Dyn. 2021. PMID: 32552361 Free PMC article.

10

Phylogenetic Analysis and Structural Perspectives of RNA-Dependent RNA-Polymerase Inhibition from SARs-CoV-2 with Natural Products.

Khan A, Khan M, Saleem S, Babar Z, Ali A, Khan AA, Sardar Z, Hamayun F, Ali SS, Wei DQ. Khan A, et al. Among authors: ali a, ali ss. Interdiscip Sci. 2020 Sep;12(3):335-348. doi: 10.1007/s12539-020-00381-9. Epub 2020 Jul 3. Interdiscip Sci. 2020. PMID: 32617855 Free PMC article.

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