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Predicting gene level sensitivity to JAK-STAT signaling perturbation using a mechanistic-to-machine learning framework.
Cheemalavagu N, Shoger KE, Cao YM, Michalides BA, Botta SA, Faeder JR, Gottschalk RA. Cheemalavagu N, et al. Among authors: shoger ke. bioRxiv [Preprint]. 2023 May 20:2023.05.19.541151. doi: 10.1101/2023.05.19.541151. bioRxiv. 2023. Update in: Cell Syst. 2024 Jan 17;15(1):37-48.e4. doi: 10.1016/j.cels.2023.12.006 PMID: 37292918 Free PMC article. Updated. Preprint.
Peptide vaccine immunotherapy biomarkers and response patterns in pediatric gliomas.
Müller S, Agnihotri S, Shoger KE, Myers MI, Smith N, Chaparala S, Villanueva CR, Chattopadhyay A, Lee AV, Butterfield LH, Diaz A, Okada H, Pollack IF, Kohanbash G. Müller S, et al. Among authors: shoger ke. JCI Insight. 2018 Apr 5;3(7):e98791. doi: 10.1172/jci.insight.98791. eCollection 2018 Apr 5. JCI Insight. 2018. PMID: 29618666 Free PMC article. Clinical Trial.
TIGIT and PD-1 Immune Checkpoint Pathways Are Associated With Patient Outcome and Anti-Tumor Immunity in Glioblastoma.
Raphael I, Kumar R, McCarl LH, Shoger K, Wang L, Sandlesh P, Sneiderman CT, Allen J, Zhai S, Campagna ML, Foster A, Bruno TC, Agnihotri S, Hu B, Castro BA, Lieberman FS, Broniscer A, Diaz AA, Amankulor NM, Rajasundaram D, Pollack IF, Kohanbash G. Raphael I, et al. Front Immunol. 2021 May 7;12:637146. doi: 10.3389/fimmu.2021.637146. eCollection 2021. Front Immunol. 2021. PMID: 34025646 Free PMC article.