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Altered infective competence of the human gut microbiome in COVID-19.
de Nies L, Galata V, Martin-Gallausiaux C, Despotovic M, Busi SB, Snoeck CJ, Delacour L, Budagavi DP, Laczny CC, Habier J, Lupu PC, Halder R, Fritz JV, Marques T, Sandt E, O'Sullivan MP, Ghosh S, Satagopam V; CON-VINCE Consortium; Krüger R, Fagherazzi G, Ollert M, Hefeng FQ, May P, Wilmes P. de Nies L, et al. Microbiome. 2023 Mar 9;11(1):46. doi: 10.1186/s40168-023-01472-7. Microbiome. 2023. PMID: 36894986 Free PMC article.
A multi-omics integrative approach unravels novel genes and pathways associated with senescence escape after targeted therapy in NRAS mutant melanoma.
Gureghian V, Herbst H, Kozar I, Mihajlovic K, Malod-Dognin N, Ceddia G, Angeli C, Margue C, Randic T, Philippidou D, Nomigni MT, Hemedan A, Tranchevent LC, Longworth J, Bauer M, Badkas A, Gaigneaux A, Muller A, Ostaszewski M, Tolle F, Pržulj N, Kreis S. Gureghian V, et al. Cancer Gene Ther. 2023 Oct;30(10):1330-1345. doi: 10.1038/s41417-023-00640-z. Epub 2023 Jul 7. Cancer Gene Ther. 2023. PMID: 37420093 Free PMC article.
Immune digital twins for complex human pathologies: applications, limitations, and challenges.
Niarakis A, Laubenbacher R, An G, Ilan Y, Fisher J, Flobak Å, Reiche K, Rodríguez Martínez M, Geris L, Ladeira L, Veschini L, Blinov ML, Messina F, Fonseca LL, Ferreira S, Montagud A, Noël V, Marku M, Tsirvouli E, Torres MM, Harris LA, Sego TJ, Cockrell C, Shick AE, Balci H, Salazar A, Rian K, Hemedan AA, Esteban-Medina M, Staumont B, Hernandez-Vargas E, Martis B S, Madrid-Valiente A, Karampelesis P, Sordo Vieira L, Harlapur P, Kulesza A, Nikaein N, Garira W, Malik Sheriff RS, Thakar J, Tran VDT, Carbonell-Caballero J, Safaei S, Valencia A, Zinovyev A, Glazier JA. Niarakis A, et al. Among authors: hemedan aa. NPJ Syst Biol Appl. 2024 Nov 30;10(1):141. doi: 10.1038/s41540-024-00450-5. NPJ Syst Biol Appl. 2024. PMID: 39616158 Free PMC article. Review.