Xiao R - Search Results

1

Leveraging spatial transcriptomics data to recover cell locations in single-cell RNA-seq with CeLEry.

Zhang Q, Jiang S, Schroeder A, Hu J, Li K, Zhang B, Dai D, Lee EB, Xiao R, Li M. Zhang Q, et al. Among authors: xiao r. Nat Commun. 2023 Jul 8;14(1):4050. doi: 10.1038/s41467-023-39895-3. Nat Commun. 2023. PMID: 37422469 Free PMC article.

2

MetaDiff: differential isoform expression analysis using random-effects meta-regression.

Jia C, Guan W, Yang A, Xiao R, Tang WH, Moravec CS, Margulies KB, Cappola TP, Li M, Li C. Jia C, et al. Among authors: xiao r. BMC Bioinformatics. 2015 Jul 2;16:208. doi: 10.1186/s12859-015-0623-z. BMC Bioinformatics. 2015. PMID: 26134005 Free PMC article.

3

Gene Mapping in Admixed Families: A Cautionary Note on the Interpretation of the Transmission Disequilibrium Test and a Possible Solution.

Wang X, Xiao R, Zhu X, Li M. Wang X, et al. Among authors: xiao r. Hum Hered. 2016;81(2):106-116. doi: 10.1159/000446956. Epub 2017 Jan 12. Hum Hered. 2016. PMID: 28076865

4

ASEP: Gene-based detection of allele-specific expression across individuals in a population by RNA sequencing.

Fan J, Hu J, Xue C, Zhang H, Susztak K, Reilly MP, Xiao R, Li M. Fan J, et al. Among authors: xiao r. PLoS Genet. 2020 May 11;16(5):e1008786. doi: 10.1371/journal.pgen.1008786. eCollection 2020 May. PLoS Genet. 2020. PMID: 32392242 Free PMC article.

5

Detecting cell-type-specific allelic expression imbalance by integrative analysis of bulk and single-cell RNA sequencing data.

Fan J, Wang X, Xiao R, Li M. Fan J, et al. Among authors: xiao r. PLoS Genet. 2021 Mar 4;17(3):e1009080. doi: 10.1371/journal.pgen.1009080. eCollection 2021 Mar. PLoS Genet. 2021. PMID: 33661921 Free PMC article.

6

Machine learning models to predict electroencephalographic seizures in critically ill children.

Hu J, Fung FW, Jacobwitz M, Parikh DS, Vala L, Donnelly M, Topjian AA, Abend NS, Xiao R. Hu J, et al. Among authors: xiao r. Seizure. 2021 Apr;87:61-68. doi: 10.1016/j.seizure.2021.03.001. Epub 2021 Mar 4. Seizure. 2021. PMID: 33714840 Free PMC article.

7

MuSiC2: cell-type deconvolution for multi-condition bulk RNA-seq data.

Fan J, Lyu Y, Zhang Q, Wang X, Li M, Xiao R. Fan J, et al. Among authors: xiao r. Brief Bioinform. 2022 Nov 19;23(6):bbac430. doi: 10.1093/bib/bbac430. Brief Bioinform. 2022. PMID: 36208175 Free PMC article.

8

Chassis-based fiber-coupled optical probe design for reproducible quantitative diffuse optical spectroscopy measurements.

Matlis GC, Zhang Q, Benson EJ, Weeks MK, Andersen K, Jahnavi J, Lafontant A, Breimann J, Hallowell T, Lin Y, Licht DJ, Yodh AG, Kilbaugh TJ, Forti RM, White BR, Baker WB, Xiao R, Ko TS. Matlis GC, et al. Among authors: xiao r. PLoS One. 2024 Jul 25;19(7):e0305254. doi: 10.1371/journal.pone.0305254. eCollection 2024. PLoS One. 2024. PMID: 39052686 Free PMC article.

9

Impact of chronic opioid use on acute health care utilization in children with IBD and arthritis: a retrospective cohort study.

Dagci AOB, Jiang S, Chang JC, Grossman AB, Xiao R, Weiss PF. Dagci AOB, et al. Among authors: xiao r. BMC Pediatr. 2024 Nov 7;24(1):711. doi: 10.1186/s12887-024-05206-y. BMC Pediatr. 2024. PMID: 39511521 Free PMC article.

10

Using Machine Learning to Identify Metabolomic Signatures of Pediatric Chronic Kidney Disease Etiology.

Lee AM, Hu J, Xu Y, Abraham AG, Xiao R, Coresh J, Rebholz C, Chen J, Rhee EP, Feldman HI, Ramachandran VS, Kimmel PL, Warady BA, Furth SL, Denburg MR; CKD Biomarkers Consortium. Lee AM, et al. Among authors: xiao r. J Am Soc Nephrol. 2022 Feb;33(2):375-386. doi: 10.1681/ASN.2021040538. Epub 2022 Jan 11. J Am Soc Nephrol. 2022. PMID: 35017168 Free PMC article.

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