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Page 1
A Comparison of Neuroelectrophysiology Databases.
Subash P, Gray A, Boswell M, Cohen SL, Garner R, Salehi S, Fisher C, Hobel S, Ghosh S, Halchenko Y, Dichter B, Poldrack RA, Markiewicz C, Hermes D, Delorme A, Makeig S, Behan B, Sparks A, Arnott SR, Wang Z, Magnotti J, Beauchamp MS, Pouratian N, Toga AW, Duncan D. Subash P, et al. Among authors: ghosh s. ArXiv [Preprint]. 2023 Aug 30:arXiv:2306.15041v2. ArXiv. 2023. Update in: Sci Data. 2023 Oct 19;10(1):719. doi: 10.1038/s41597-023-02614-0 PMID: 37426452 Free PMC article. Updated. Preprint.
Align with the NMIND consortium for better neuroimaging.
Kiar G, Clucas J, Feczko E, Goncalves M, Jarecka D, Markiewicz CJ, Halchenko YO, Hermosillo R, Li X, Miranda-Dominguez O, Ghosh S, Poldrack RA, Satterthwaite TD, Milham MP, Fair D. Kiar G, et al. Among authors: ghosh s. Nat Hum Behav. 2023 Jul;7(7):1027-1028. doi: 10.1038/s41562-023-01647-0. Nat Hum Behav. 2023. PMID: 37386112 Free PMC article. No abstract available.
A guide to the BRAIN Initiative Cell Census Network data ecosystem.
Hawrylycz M, Martone ME, Ascoli GA, Bjaalie JG, Dong HW, Ghosh SS, Gillis J, Hertzano R, Haynor DR, Hof PR, Kim Y, Lein E, Liu Y, Miller JA, Mitra PP, Mukamel E, Ng L, Osumi-Sutherland D, Peng H, Ray PL, Sanchez R, Regev A, Ropelewski A, Scheuermann RH, Tan SZK, Thompson CL, Tickle T, Tilgner H, Varghese M, Wester B, White O, Zeng H, Aevermann B, Allemang D, Ament S, Athey TL, Baker C, Baker KS, Baker PM, Bandrowski A, Banerjee S, Bishwakarma P, Carr A, Chen M, Choudhury R, Cool J, Creasy H, D'Orazi F, Degatano K, Dichter B, Ding SL, Dolbeare T, Ecker JR, Fang R, Fillion-Robin JC, Fliss TP, Gee J, Gillespie T, Gouwens N, Zhang GQ, Halchenko YO, Harris NL, Herb BR, Hintiryan H, Hood G, Horvath S, Huo B, Jarecka D, Jiang S, Khajouei F, Kiernan EA, Kir H, Kruse L, Lee C, Lelieveldt B, Li Y, Liu H, Liu L, Markuhar A, Mathews J, Mathews KL, Mezias C, Miller MI, Mollenkopf T, Mufti S, Mungall CJ, Orvis J, Puchades MA, Qu L, Receveur JP, Ren B, Sjoquist N, Staats B, Tward D, van Velthoven CTJ, Wang Q, Xie F, Xu H, Yao Z, Yun Z, Zhang YR, Zheng WJ, Zingg B. Hawrylycz M, et al. Among authors: ghosh ss. PLoS Biol. 2023 Jun 30;21(6):e3002133. doi: 10.1371/journal.pbio.3002133. eCollection 2023 Jun. PLoS Biol. 2023. PMID: 37390046 Free PMC article.
A reproducible and generalizable software workflow for analysis of large-scale neuroimaging data collections using BIDS Apps.
Zhao C, Jarecka D, Covitz S, Chen Y, Eickhoff SB, Fair DA, Franco AR, Halchenko YO, Hendrickson TJ, Hoffstaedter F, Houghton A, Kiar G, Macdonald A, Mehta K, Milham MP, Salo T, Hanke M, Ghosh SS, Cieslak M, Satterthwaite TD. Zhao C, et al. Among authors: ghosh ss. bioRxiv [Preprint]. 2023 Aug 18:2023.08.16.552472. doi: 10.1101/2023.08.16.552472. bioRxiv. 2023. PMID: 37645999 Free PMC article. Preprint.
DataLad: distributed system for joint management of code, data, and their relationship.
Halchenko YO, Meyer K, Poldrack B, Solanky DS, Wagner AS, Gors J, MacFarlane D, Pustina D, Sochat V, Ghosh SS, Mönch C, Markiewicz CJ, Waite L, Shlyakhter I, de la Vega A, Hayashi S, Häusler CO, Poline JB, Kadelka T, Skytén K, Jarecka D, Kennedy D, Strauss T, Cieslak M, Vavra P, Ioanas HI, Schneider R, Pflüger M, Haxby JV, Eickhoff SB, Hanke M. Halchenko YO, et al. Among authors: ghosh ss. J Open Source Softw. 2021;6(63):3262. doi: 10.21105/joss.03262. Epub 2021 Jul 1. J Open Source Softw. 2021. PMID: 39469147 Free PMC article.
Changing maternal and child nutrition practices through integrating social and behavior change interventions in community-based self-help and support groups: literature review from Bangladesh, India, and Vietnam.
Verma A, Nguyen T, Purty A, Pradhan N, Husan A, Zambrano P, Mahmud Z, Ghosh S, Mathisen R, Forissier T. Verma A, et al. Among authors: ghosh s. Front Nutr. 2024 Nov 14;11:1464822. doi: 10.3389/fnut.2024.1464822. eCollection 2024. Front Nutr. 2024. PMID: 39610881 Free PMC article.
Updated resources for exploring experimentally-determined PDB structures and Computed Structure Models at the RCSB Protein Data Bank.
Burley SK, Bhatt R, Bhikadiya C, Bi C, Biester A, Biswas P, Bittrich S, Blaumann S, Brown R, Chao H, Chithari VR, Craig PA, Crichlow GV, Duarte JM, Dutta S, Feng Z, Flatt JW, Ghosh S, Goodsell DS, Green RK, Guranovic V, Henry J, Hudson BP, Joy M, Kaelber JT, Khokhriakov I, Lai JS, Lawson CL, Liang Y, Myers-Turnbull D, Peisach E, Persikova I, Piehl DW, Pingale A, Rose Y, Sagendorf J, Sali A, Segura J, Sekharan M, Shao C, Smith J, Trumbull M, Vallat B, Voigt M, Webb B, Whetstone S, Wu-Wu A, Xing T, Young JY, Zalevsky A, Zardecki C. Burley SK, et al. Among authors: ghosh s. Nucleic Acids Res. 2024 Nov 28:gkae1091. doi: 10.1093/nar/gkae1091. Online ahead of print. Nucleic Acids Res. 2024. PMID: 39607707
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