Kaplinsky J - Search Results

1

Scaling Monte-Carlo-Based Inference on Antibody and TCR Repertoires.

Couch J, Arora R, Braun J, Kaplinsky J, Hill E, Li A, Altschul B, Arnaout R. Couch J, et al. Among authors: kaplinsky j. ArXiv [Preprint]. 2023 Dec 19:arXiv:2312.12525v1. ArXiv. 2023. PMID: 38196748 Free PMC article. Preprint.

2

Tumor monocyte content predicts immunochemotherapy outcomes in esophageal adenocarcinoma.

Carroll TM, Chadwick JA, Owen RP, White MJ, Kaplinsky J, Peneva I, Frangou A, Xie PF, Chang J, Roth A, Amess B, James SA, Rei M, Fuchs HS, McCann KJ, Omiyale AO, Jacobs BA, Lord SR, Norris-Bulpitt S, Dobbie ST, Griffiths L, Ramirez KA, Ricciardi T, Macri MJ, Ryan A, Venhaus RR, Van den Eynde BJ, Karydis I, Schuster-Böckler B, Middleton MR, Lu X; LUD2015-005 Project Team. Carroll TM, et al. Among authors: kaplinsky j. Cancer Cell. 2023 Jul 10;41(7):1222-1241.e7. doi: 10.1016/j.ccell.2023.06.006. Cancer Cell. 2023. PMID: 37433281 Free article.

3

Signatures of T cell immunity revealed using sequence similarity with TCRDivER algorithm.

Vujović M, Marcatili P, Chain B, Kaplinsky J, Andresen TL. Vujović M, et al. Among authors: kaplinsky j. Commun Biol. 2023 Mar 31;6(1):357. doi: 10.1038/s42003-023-04702-8. Commun Biol. 2023. PMID: 37002292 Free PMC article.

4

T cell receptor sequence clustering and antigen specificity.

Vujovic M, Degn KF, Marin FI, Schaap-Johansen AL, Chain B, Andresen TL, Kaplinsky J, Marcatili P. Vujovic M, et al. Among authors: kaplinsky j. Comput Struct Biotechnol J. 2020 Aug 5;18:2166-2173. doi: 10.1016/j.csbj.2020.06.041. eCollection 2020. Comput Struct Biotechnol J. 2020. PMID: 32952933 Free PMC article. Review.

5

SMAC mimetics promote NIK-dependent inhibition of CD4⁺ T_H17 cell differentiation.

Rizk J, Kaplinsky J, Agerholm R, Kadekar D, Ivars F, Agace WW, Wong WW, Szucs MJ, Myers SA, Carr SA, Waisman A, Bekiaris V. Rizk J, et al. Among authors: kaplinsky j. Sci Signal. 2019 Aug 27;12(596):eaaw3469. doi: 10.1126/scisignal.aaw3469. Sci Signal. 2019. PMID: 31455723 Free article.

6

Improved Targeting of Cancers with Nanotherapeutics.

Foster C, Watson A, Kaplinsky J, Kamaly N. Foster C, et al. Among authors: kaplinsky j. Methods Mol Biol. 2017;1530:13-37. doi: 10.1007/978-1-4939-6646-2_2. Methods Mol Biol. 2017. PMID: 28150194

7

Robust estimates of overall immune-repertoire diversity from high-throughput measurements on samples.

Kaplinsky J, Arnaout R. Kaplinsky J, et al. Nat Commun. 2016 Jun 15;7:11881. doi: 10.1038/ncomms11881. Nat Commun. 2016. PMID: 27302887 Free PMC article.

8

Antibody repertoire deep sequencing reveals antigen-independent selection in maturing B cells.

Kaplinsky J, Li A, Sun A, Coffre M, Koralov SB, Arnaout R. Kaplinsky J, et al. Proc Natl Acad Sci U S A. 2014 Jun 24;111(25):E2622-9. doi: 10.1073/pnas.1403278111. Epub 2014 Jun 9. Proc Natl Acad Sci U S A. 2014. PMID: 24927543 Free PMC article.

9

Absolute quantification of protein copy number using a single-molecule-sensitive microarray.

Burgin E, Salehi-Reyhani A, Barclay M, Brown A, Kaplinsky J, Novakova M, Neil MA, Ces O, Willison KR, Klug DR. Burgin E, et al. Among authors: kaplinsky j. Analyst. 2014 Jul 7;139(13):3235-44. doi: 10.1039/c4an00091a. Analyst. 2014. PMID: 24676423

10

A first step towards practical single cell proteomics: a microfluidic antibody capture chip with TIRF detection.

Salehi-Reyhani A, Kaplinsky J, Burgin E, Novakova M, deMello AJ, Templer RH, Parker P, Neil MA, Ces O, French P, Willison KR, Klug D. Salehi-Reyhani A, et al. Among authors: kaplinsky j. Lab Chip. 2011 Apr 7;11(7):1256-61. doi: 10.1039/c0lc00613k. Epub 2011 Feb 23. Lab Chip. 2011. PMID: 21347466 Free article.

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