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A modular chemigenetic calcium indicator enables in vivo functional imaging with near-infrared light.
Farrants H, Shuai Y, Lemon WC, Hernandez CM, Yang S, Patel R, Qiao G, Frei MS, Grimm JB, Hanson TL, Tomaska F, Turner GC, Stringer C, Keller PJ, Beyene AG, Chen Y, Liang Y, Lavis LD, Schreiter ER. Farrants H, et al. Among authors: patel r. bioRxiv [Preprint]. 2023 Jul 19:2023.07.18.549527. doi: 10.1101/2023.07.18.549527. bioRxiv. 2023. Update in: Nat Methods. 2024 Oct;21(10):1916-1925. doi: 10.1038/s41592-024-02411-6 PMID: 37503182 Free PMC article. Updated. Preprint.
Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics.
Akerboom J, Carreras Calderón N, Tian L, Wabnig S, Prigge M, Tolö J, Gordus A, Orger MB, Severi KE, Macklin JJ, Patel R, Pulver SR, Wardill TJ, Fischer E, Schüler C, Chen TW, Sarkisyan KS, Marvin JS, Bargmann CI, Kim DS, Kügler S, Lagnado L, Hegemann P, Gottschalk A, Schreiter ER, Looger LL. Akerboom J, et al. Among authors: patel r. Front Mol Neurosci. 2013 Mar 4;6:2. doi: 10.3389/fnmol.2013.00002. eCollection 2013. Front Mol Neurosci. 2013. PMID: 23459413 Free PMC article.
A general method to improve fluorophores for live-cell and single-molecule microscopy.
Grimm JB, English BP, Chen J, Slaughter JP, Zhang Z, Revyakin A, Patel R, Macklin JJ, Normanno D, Singer RH, Lionnet T, Lavis LD. Grimm JB, et al. Among authors: patel r. Nat Methods. 2015 Mar;12(3):244-50, 3 p following 250. doi: 10.1038/nmeth.3256. Epub 2015 Jan 19. Nat Methods. 2015. PMID: 25599551 Free PMC article.
Sensitive red protein calcium indicators for imaging neural activity.
Dana H, Mohar B, Sun Y, Narayan S, Gordus A, Hasseman JP, Tsegaye G, Holt GT, Hu A, Walpita D, Patel R, Macklin JJ, Bargmann CI, Ahrens MB, Schreiter ER, Jayaraman V, Looger LL, Svoboda K, Kim DS. Dana H, et al. Among authors: patel r. Elife. 2016 Mar 24;5:e12727. doi: 10.7554/eLife.12727. Elife. 2016. PMID: 27011354 Free PMC article.
A general method to fine-tune fluorophores for live-cell and in vivo imaging.
Grimm JB, Muthusamy AK, Liang Y, Brown TA, Lemon WC, Patel R, Lu R, Macklin JJ, Keller PJ, Ji N, Lavis LD. Grimm JB, et al. Among authors: patel r. Nat Methods. 2017 Oct;14(10):987-994. doi: 10.1038/nmeth.4403. Epub 2017 Sep 4. Nat Methods. 2017. PMID: 28869757 Free PMC article.
A genetically encoded Ca2+ indicator based on circularly permutated sea anemone red fluorescent protein eqFP578.
Shen Y, Dana H, Abdelfattah AS, Patel R, Shea J, Molina RS, Rawal B, Rancic V, Chang YF, Wu L, Chen Y, Qian Y, Wiens MD, Hambleton N, Ballanyi K, Hughes TE, Drobizhev M, Kim DS, Koyama M, Schreiter ER, Campbell RE. Shen Y, et al. Among authors: patel r. BMC Biol. 2018 Jan 16;16(1):9. doi: 10.1186/s12915-018-0480-0. BMC Biol. 2018. PMID: 29338710 Free PMC article.
Bright and photostable chemigenetic indicators for extended in vivo voltage imaging.
Abdelfattah AS, Kawashima T, Singh A, Novak O, Liu H, Shuai Y, Huang YC, Campagnola L, Seeman SC, Yu J, Zheng J, Grimm JB, Patel R, Friedrich J, Mensh BD, Paninski L, Macklin JJ, Murphy GJ, Podgorski K, Lin BJ, Chen TW, Turner GC, Liu Z, Koyama M, Svoboda K, Ahrens MB, Lavis LD, Schreiter ER. Abdelfattah AS, et al. Among authors: patel r. Science. 2019 Aug 16;365(6454):699-704. doi: 10.1126/science.aav6416. Epub 2019 Aug 1. Science. 2019. PMID: 31371562
Correction to: A genetically encoded Ca2+ indicator based on circularly permutated sea anemone red fluorescent protein eqFP578.
Shen Y, Dana H, Abdelfattah AS, Patel R, Shea J, Molina RS, Rawal B, Rancic V, Chang YF, Wu L, Chen Y, Qian Y, Wiens MD, Hambleton N, Ballanyi K, Hughes TE, Drobizhev M, Kim DS, Koyama M, Schreiter ER, Campbell RE. Shen Y, et al. Among authors: patel r. BMC Biol. 2019 Oct 30;17(1):85. doi: 10.1186/s12915-019-0707-8. BMC Biol. 2019. PMID: 31666064 Free PMC article.
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