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LIPID MAPS: update to databases and tools for the lipidomics community.
Conroy MJ, Andrews RM, Andrews S, Cockayne L, Dennis EA, Fahy E, Gaud C, Griffiths WJ, Jukes G, Kolchin M, Mendivelso K, Lopez-Clavijo AF, Ready C, Subramaniam S, O'Donnell VB. Conroy MJ, et al. Nucleic Acids Res. 2024 Jan 5;52(D1):D1677-D1682. doi: 10.1093/nar/gkad896. Nucleic Acids Res. 2024. PMID: 37855672 Free PMC article.
LipidFinder 2.0: advanced informatics pipeline for lipidomics discovery applications.
Alvarez-Jarreta J, Rodrigues PRS, Fahy E, O'Connor A, Price A, Gaud C, Andrews S, Benton P, Siuzdak G, Hawksworth JI, Valdivia-Garcia M, Allen SM, O'Donnell VB. Alvarez-Jarreta J, et al. Bioinformatics. 2021 Jun 16;37(10):1478-1479. doi: 10.1093/bioinformatics/btaa856. Bioinformatics. 2021. PMID: 33027502 Free PMC article.
Update on LIPID MAPS classification, nomenclature, and shorthand notation for MS-derived lipid structures.
Liebisch G, Fahy E, Aoki J, Dennis EA, Durand T, Ejsing CS, Fedorova M, Feussner I, Griffiths WJ, Köfeler H, Merrill AH Jr, Murphy RC, O'Donnell VB, Oskolkova O, Subramaniam S, Wakelam MJO, Spener F. Liebisch G, et al. J Lipid Res. 2020 Dec;61(12):1539-1555. doi: 10.1194/jlr.S120001025. Epub 2020 Oct 9. J Lipid Res. 2020. PMID: 33037133 Free PMC article. Review.
The Biosynthesis of Enzymatically Oxidized Lipids.
Hajeyah AA, Griffiths WJ, Wang Y, Finch AJ, O'Donnell VB. Hajeyah AA, et al. Front Endocrinol (Lausanne). 2020 Nov 19;11:591819. doi: 10.3389/fendo.2020.591819. eCollection 2020. Front Endocrinol (Lausanne). 2020. PMID: 33329396 Free PMC article. Review.
Quality control requirements for the correct annotation of lipidomics data.
Köfeler HC, Eichmann TO, Ahrends R, Bowden JA, Danne-Rasche N, Dennis EA, Fedorova M, Griffiths WJ, Han X, Hartler J, Holčapek M, Jirásko R, Koelmel JP, Ejsing CS, Liebisch G, Ni Z, O'Donnell VB, Quehenberger O, Schwudke D, Shevchenko A, Wakelam MJO, Wenk MR, Wolrab D, Ekroos K. Köfeler HC, et al. Nat Commun. 2021 Aug 6;12(1):4771. doi: 10.1038/s41467-021-24984-y. Nat Commun. 2021. PMID: 34362906 Free PMC article. No abstract available.
155 results