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An approach for collaborative development of a federated biomedical knowledge graph-based question-answering system: Question-of-the-Month challenges.
Fecho K, Bizon C, Issabekova T, Moxon S, Thessen AE, Abdollahi S, Baranzini SE, Belhu B, Byrd WE, Chung L, Crouse A, Duby MP, Ferguson S, Foksinska A, Forero L, Friedman J, Gardner V, Glusman G, Hadlock J, Hanspers K, Hinderer E, Hobbs C, Hyde G, Huang S, Koslicki D, Mease P, Muller S, Mungall CJ, Ramsey SA, Roach J, Rubin I, Schurman SH, Shalev A, Smith B, Soman K, Stemann S, Su AI, Ta C, Watkins PB, Williams MD, Wu C, Xu CH; Biomedical Data Translator Consortium. Fecho K, et al. Among authors: glusman g. J Clin Transl Sci. 2023 Sep 14;7(1):e214. doi: 10.1017/cts.2023.619. eCollection 2023. J Clin Transl Sci. 2023. PMID: 37900350 Free PMC article.
Lifespan-extending interventions induce consistent patterns of fatty acid oxidation in mouse livers.
Watanabe K, Wilmanski T, Baloni P, Robinson M, Garcia GG, Hoopmann MR, Midha MK, Baxter DH, Maes M, Morrone SR, Crebs KM, Kapil C, Kusebauch U, Wiedrick J, Lapidus J, Pflieger L, Lausted C, Roach JC, Glusman G, Cummings SR, Schork NJ, Price ND, Hood L, Miller RA, Moritz RL, Rappaport N. Watanabe K, et al. Among authors: glusman g. Commun Biol. 2023 Jul 22;6(1):768. doi: 10.1038/s42003-023-05128-y. Commun Biol. 2023. PMID: 37481675 Free PMC article.
Author Correction: Lifespan-extending interventions induce consistent patterns of fatty acid oxidation in mouse livers.
Watanabe K, Wilmanski T, Baloni P, Robinson M, Garcia GG, Hoopmann MR, Midha MK, Baxter DH, Maes M, Morrone SR, Crebs KM, Kapil C, Kusebauch U, Wiedrick J, Lapidus J, Pflieger L, Lausted C, Roach JC, Glusman G, Cummings SR, Schork NJ, Price ND, Hood L, Miller RA, Moritz RL, Rappaport N. Watanabe K, et al. Among authors: glusman g. Commun Biol. 2023 Nov 27;6(1):1208. doi: 10.1038/s42003-023-05549-9. Commun Biol. 2023. PMID: 38012377 Free PMC article. No abstract available.
The relationship between 11 different polygenic longevity scores, parental lifespan, and disease diagnosis in the UK Biobank.
Don J, Schork AJ, Glusman G, Rappaport N, Cummings SR, Duggan D, Raju A, Hellberg KG, Gunn S, Monti S, Perls T, Lapidus J, Goetz LH, Sebastiani P, Schork NJ. Don J, et al. Among authors: glusman g. Geroscience. 2024 Aug;46(4):3911-3927. doi: 10.1007/s11357-024-01107-1. Epub 2024 Mar 7. Geroscience. 2024. PMID: 38451433 Free PMC article.
Generating Biomedical Knowledge Graphs from Knowledge Bases, Registries, and Multiomic Data.
Qin G, Narsinh K, Wei Q, Roach JC, Joshi A, Goetz SL, Moxon ST, Brush MH, Xu C, Yao Y, Glen AK, Morris ED, Ralevski A, Roper R, Belhu B, Zhang Y, Shmulevich I, Hadlock J, Glusman G. Qin G, et al. Among authors: glusman g. bioRxiv [Preprint]. 2024 Nov 15:2024.11.14.623648. doi: 10.1101/2024.11.14.623648. bioRxiv. 2024. PMID: 39605475 Free PMC article. Preprint.
APOE Genotype and Biological Age Impact Inter-Omic Associations Related to Bioenergetics.
Ellis D, Watanabe K, Wilmanski T, Lustgarten MS, Korat AVA, Glusman G, Hadlock JJ, Fiehn O, Sebastiani P, Price ND, Hood L, Magis AT, Evans SJ, Pflieger L, Lovejoy JC, Gibbons SM, Funk CC, Baloni P, Rappaport N. Ellis D, et al. Among authors: glusman g. bioRxiv [Preprint]. 2024 Nov 12:2024.10.17.618322. doi: 10.1101/2024.10.17.618322. bioRxiv. 2024. PMID: 39605362 Free PMC article. Preprint.
Correction: Reproducible big data science: A case study in continuous FAIRness.
Madduri R, Chard K, D'Arcy M, Jung SC, Rodriguez A, Sulakhe D, Deutsch E, Funk C, Heavner B, Richards M, Shannon P, Glusman G, Price N, Kesselman C, Foster I. Madduri R, et al. Among authors: glusman g. PLoS One. 2023 Nov 21;18(11):e0294883. doi: 10.1371/journal.pone.0294883. eCollection 2023. PLoS One. 2023. PMID: 37988378 Free PMC article.
Biolink Model: A universal schema for knowledge graphs in clinical, biomedical, and translational science.
Unni DR, Moxon SAT, Bada M, Brush M, Bruskiewich R, Caufield JH, Clemons PA, Dancik V, Dumontier M, Fecho K, Glusman G, Hadlock JJ, Harris NL, Joshi A, Putman T, Qin G, Ramsey SA, Shefchek KA, Solbrig H, Soman K, Thessen AE, Haendel MA, Bizon C, Mungall CJ; Biomedical Data Translator Consortium. Unni DR, et al. Among authors: glusman g. Clin Transl Sci. 2022 Aug;15(8):1848-1855. doi: 10.1111/cts.13302. Epub 2022 Jun 6. Clin Transl Sci. 2022. PMID: 36125173 Free PMC article. Review.
108 results