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Integrating viruses into soil food web biogeochemistry.
Nat Microbiol. 2024 Aug;9(8):1918-1928. doi: 10.1038/s41564-024-01767-x. Epub 2024 Aug 2.
Nat Microbiol. 2024.
PMID: 39095499
Review.
MuDoGeR: Multi-Domain Genome recovery from metagenomes made easy.
Rocha U, Coelho Kasmanas J, Kallies R, Saraiva JP, Toscan RB, Štefanič P, Bicalho MF, Borim Correa F, Baştürk MN, Fousekis E, Viana Barbosa LM, Plewka J, Probst AJ, Baldrian P, Stadler PF; CLUE-TERRA Consortium.
Rocha U, et al. Among authors: borim correa f.
Mol Ecol Resour. 2024 Feb;24(2):e13904. doi: 10.1111/1755-0998.13904. Epub 2023 Nov 23.
Mol Ecol Resour. 2024.
PMID: 37994269
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StandEnA: a customizable workflow for standardized annotation and generating a presence-absence matrix of proteins.
Chafra F, Borim Correa F, Oni F, Konu Karakayalı Ö, Stadler PF, Nunes da Rocha U.
Chafra F, et al. Among authors: borim correa f.
Bioinform Adv. 2023 Jun 9;3(1):vbad069. doi: 10.1093/bioadv/vbad069. eCollection 2023.
Bioinform Adv. 2023.
PMID: 37448812
Free PMC article.
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Combining Flow Cytometry and Metagenomics Improves Recovery of Metagenome-Assembled Genomes in a Cell Culture from Activated Sludge.
Abdulkadir N, Saraiva JP, Schattenberg F, Toscan RB, Borim Correa F, Harms H, Müller S, da Rocha UN.
Abdulkadir N, et al. Among authors: borim correa f.
Microorganisms. 2023 Jan 10;11(1):175. doi: 10.3390/microorganisms11010175.
Microorganisms. 2023.
PMID: 36677467
Free PMC article.
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