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MuDoGeR: Multi-Domain Genome recovery from metagenomes made easy.
Rocha U, Coelho Kasmanas J, Kallies R, Saraiva JP, Toscan RB, Štefanič P, Bicalho MF, Borim Correa F, Baştürk MN, Fousekis E, Viana Barbosa LM, Plewka J, Probst AJ, Baldrian P, Stadler PF; CLUE-TERRA Consortium. Rocha U, et al. Among authors: coelho kasmanas j. Mol Ecol Resour. 2024 Feb;24(2):e13904. doi: 10.1111/1755-0998.13904. Epub 2023 Nov 23. Mol Ecol Resour. 2024. PMID: 37994269
MarineMetagenomeDB: a public repository for curated and standardized metadata for marine metagenomes.
Nata'ala MK, Avila Santos AP, Coelho Kasmanas J, Bartholomäus A, Saraiva JP, Godinho Silva S, Keller-Costa T, Costa R, Gomes NCM, Ponce de Leon Ferreira de Carvalho AC, Stadler PF, Sipoli Sanches D, Nunes da Rocha U. Nata'ala MK, et al. Among authors: coelho kasmanas j. Environ Microbiome. 2022 Nov 18;17(1):57. doi: 10.1186/s40793-022-00449-7. Environ Microbiome. 2022. PMID: 36401317 Free PMC article.