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Page 1
Protein Dynamics to Define and Refine Disordered Protein Ensembles.
Naullage PM, Haghighatlari M, Namini A, Teixeira JMC, Li J, Zhang O, Gradinaru CC, Forman-Kay JD, Head-Gordon T. Naullage PM, et al. Among authors: teixeira jmc. J Phys Chem B. 2022 Mar 10;126(9):1885-1894. doi: 10.1021/acs.jpcb.1c10925. Epub 2022 Feb 25. J Phys Chem B. 2022. PMID: 35213160 Free PMC article.
[No title available]
[No authors listed] [No authors listed] PMID: 36782990
Is ambient water inhomogeneous on the nanometer-length scale?
Soper AK, Teixeira J, Head-Gordon T. Soper AK, et al. Proc Natl Acad Sci U S A. 2010 Mar 23;107(12):E44; author reply E45. doi: 10.1073/pnas.0912158107. Epub 2010 Mar 10. Proc Natl Acad Sci U S A. 2010. PMID: 20220097 Free PMC article. No abstract available.
Impact of AlphaFold on structure prediction of protein complexes: The CASP15-CAPRI experiment.
Lensink MF, Brysbaert G, Raouraoua N, Bates PA, Giulini M, Honorato RV, van Noort C, Teixeira JMC, Bonvin AMJJ, Kong R, Shi H, Lu X, Chang S, Liu J, Guo Z, Chen X, Morehead A, Roy RS, Wu T, Giri N, Quadir F, Chen C, Cheng J, Del Carpio CA, Ichiishi E, Rodriguez-Lumbreras LA, Fernandez-Recio J, Harmalkar A, Chu LS, Canner S, Smanta R, Gray JJ, Li H, Lin P, He J, Tao H, Huang SY, Roel-Touris J, Jimenez-Garcia B, Christoffer CW, Jain AJ, Kagaya Y, Kannan H, Nakamura T, Terashi G, Verburgt JC, Zhang Y, Zhang Z, Fujuta H, Sekijima M, Kihara D, Khan O, Kotelnikov S, Ghani U, Padhorny D, Beglov D, Vajda S, Kozakov D, Negi SS, Ricciardelli T, Barradas-Bautista D, Cao Z, Chawla M, Cavallo L, Oliva R, Yin R, Cheung M, Guest JD, Lee J, Pierce BG, Shor B, Cohen T, Halfon M, Schneidman-Duhovny D, Zhu S, Yin R, Sun Y, Shen Y, Maszota-Zieleniak M, Bojarski KK, Lubecka EA, Marcisz M, Danielsson A, Dziadek L, Gaardlos M, Gieldon A, Liwo A, Samsonov SA, Slusarz R, Zieba K, Sieradzan AK, Czaplewski C, Kobayashi S, Miyakawa Y, Kiyota Y, Takeda-Shitaka M, Olechnovic K, Valancauskas L, Dapkunas J, Venclovas C, Wallner B, Yang L, Hou C, He X, Guo S, Jiang S, Ma X, Duan R, Qui L, Xu X, Zou X, Vela… See abstract for full author list ➔ Lensink MF, et al. Among authors: teixeira jmc. Proteins. 2023 Dec;91(12):1658-1683. doi: 10.1002/prot.26609. Epub 2023 Oct 31. Proteins. 2023. PMID: 37905971 Free PMC article.
Local Disordered Region Sampling (LDRS) for Ensemble Modeling of Proteins with Experimentally Undetermined or Low Confidence Prediction Segments.
Liu ZH, Teixeira JMC, Zhang O, Tsangaris TE, Li J, Gradinaru CC, Head-Gordon T, Forman-Kay JD. Liu ZH, et al. Among authors: teixeira jmc. bioRxiv [Preprint]. 2023 Jul 27:2023.07.25.550520. doi: 10.1101/2023.07.25.550520. bioRxiv. 2023. Update in: Bioinformatics. 2023 Dec 1;39(12):btad739. doi: 10.1093/bioinformatics/btad739 PMID: 37546943 Free PMC article. Updated. Preprint.
33 results