Ye C - Search Results

1

Profiling of RNA-binding protein binding sites by in situ reverse transcription-based sequencing.

Xiao Y, Chen YM, Zou Z, Ye C, Dou X, Wu J, Liu C, Liu S, Yan H, Wang P, Zeng TB, Liu Q, Fei J, Tang W, He C. Xiao Y, et al. Among authors: ye c. Nat Methods. 2024 Feb;21(2):247-258. doi: 10.1038/s41592-023-02146-w. Epub 2024 Jan 10. Nat Methods. 2024. PMID: 38200227 Free PMC article.

2

Quantitative sequencing using BID-seq uncovers abundant pseudouridines in mammalian mRNA at base resolution.

Dai Q, Zhang LS, Sun HL, Pajdzik K, Yang L, Ye C, Ju CW, Liu S, Wang Y, Zheng Z, Zhang L, Harada BT, Dou X, Irkliyenko I, Feng X, Zhang W, Pan T, He C. Dai Q, et al. Among authors: ye c. Nat Biotechnol. 2023 Mar;41(3):344-354. doi: 10.1038/s41587-022-01505-w. Epub 2022 Oct 27. Nat Biotechnol. 2023. PMID: 36302989 Free PMC article.

3

m⁷G-quant-seq: Quantitative Detection of RNA Internal N⁷-Methylguanosine.

Zhang LS, Ju CW, Liu C, Wei J, Dai Q, Chen L, Ye C, He C. Zhang LS, et al. Among authors: ye c. ACS Chem Biol. 2022 Dec 16;17(12):3306-3312. doi: 10.1021/acschembio.2c00792. Epub 2022 Nov 18. ACS Chem Biol. 2022. PMID: 36398936 Free PMC article.

4

m⁶A-SAC-seq for quantitative whole transcriptome m⁶A profiling.

Ge R, Ye C, Peng Y, Dai Q, Zhao Y, Liu S, Wang P, Hu L, He C. Ge R, et al. Among authors: ye c. Nat Protoc. 2023 Feb;18(2):626-657. doi: 10.1038/s41596-022-00765-9. Epub 2022 Nov 25. Nat Protoc. 2023. PMID: 36434097 Free PMC article. Review.

5

Nm-Mut-seq: a base-resolution quantitative method for mapping transcriptome-wide 2'-O-methylation.

Chen L, Zhang LS, Ye C, Zhou H, Liu B, Gao B, Deng Z, Zhao C, He C, Dickinson BC. Chen L, et al. Among authors: ye c. Cell Res. 2023 Sep;33(9):727-730. doi: 10.1038/s41422-023-00836-w. Epub 2023 Jun 15. Cell Res. 2023. PMID: 37316584 Free PMC article. No abstract available.

6

YTHDF2/m⁶ A/NF-κB axis controls anti-tumor immunity by regulating intratumoral Tregs.

Zhang L, Dou X, Zheng Z, Ye C, Lu TX, Liang HL, Wang L, Weichselbaum RR, He C. Zhang L, et al. Among authors: ye c. EMBO J. 2023 Aug 1;42(15):e113126. doi: 10.15252/embj.2022113126. Epub 2023 Jun 22. EMBO J. 2023. PMID: 37345898 Free PMC article.

7

Author Correction: m⁶A-SAC-seq for quantitative whole transcriptome m⁶A profiling.

Ge R, Ye C, Peng Y, Dai Q, Zhao Y, Liu S, Wang P, Hu L, He C. Ge R, et al. Among authors: ye c. Nat Protoc. 2023 Nov;18(11):3652. doi: 10.1038/s41596-023-00862-3. Nat Protoc. 2023. PMID: 37349502 No abstract available.

8

RBFOX2 recognizes N⁶-methyladenosine to suppress transcription and block myeloid leukaemia differentiation.

Dou X, Xiao Y, Shen C, Wang K, Wu T, Liu C, Li Y, Yu X, Liu J, Dai Q, Pajdzik K, Ye C, Ge R, Gao B, Yu J, Sun S, Chen M, Chen J, He C. Dou X, et al. Among authors: ye c. Nat Cell Biol. 2023 Sep;25(9):1359-1368. doi: 10.1038/s41556-023-01213-w. Epub 2023 Aug 28. Nat Cell Biol. 2023. PMID: 37640841 Free PMC article.

9

Analysis of genome-wide 5-hydroxymethylation of blood samples stored in different anticoagulants: opportunities for the expansion of clinical resources for epigenetic research.

Gao L, Zhang Z, Cui XL, West-Szymanski D, Ye C, He C, Zhang W, Bissonnette M. Gao L, et al. Among authors: ye c. Epigenetics. 2023 Dec;18(1):2271692. doi: 10.1080/15592294.2023.2271692. Epub 2023 Oct 29. Epigenetics. 2023. PMID: 37898998 Free PMC article.

10

Chemical Proteomic Discovery of Isotype-Selective Covalent Inhibitors of the RNA Methyltransferase NSUN2.

Tao Y, Felber JG, Zou Z, Njomen E, Remsberg JR, Ogasawara D, Ye C, Melillo B, Schreiber SL, He C, Remillard D, Cravatt BF. Tao Y, et al. Among authors: ye c. Angew Chem Int Ed Engl. 2023 Dec 18;62(51):e202311924. doi: 10.1002/anie.202311924. Epub 2023 Nov 14. Angew Chem Int Ed Engl. 2023. PMID: 37909922

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